RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 NOP16Q9Y3C1 178 aaKnown RBP5.39□□□□□ -1.55
LIG3-206ENST00000586058 V9GYS6 101 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ESPL1Q14674 2120 aa5.39□□□□□ -1.55
LIG3-206ENST00000586058 ALPK2Q86TB3 2170 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR5H1A6NKK0 313 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 POM121CA8CG34 1229 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ZNHIT1O43257 154 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 HPGDSO60760 199 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 CRYAAP02489 173 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 APOA1P02647 267 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 CSTBP04080 98 aaKnown RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 BMP4P12644 408 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 CBR1P16152 277 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PPP3CBP16298 524 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PSMB1P20618 241 aaKnown RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 GCH1P30793 250 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 DDOSTP39656 456 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ETV6P41212 452 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 CA7P43166 264 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ASCL1P50553 236 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ART1P52961 327 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PPP5CP53041 499 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ATP1B3P54709 279 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 CAV3P56539 151 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR10A3P58181 314 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 SELENOVP59797 346 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 MRPS10P82664 201 aaKnown RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 MZT1Q08AG7 82 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 FOXF2Q12947 444 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 RIN1Q13671 783 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 LY6DQ14210 128 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 GPR176Q14439 515 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PPA1Q15181 289 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 RGS21Q2M5E4 152 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 TUSC1Q2TAM9 212 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 SNAI3Q3KNW1 292 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PRR30Q53SZ7 412 aaPredicted RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 CLVS2Q5SYC1 327 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 GLYATL3Q5SZD4 288 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PLCXD3Q63HM9 321 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 RTL6Q6ICC9 239 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 LHFPL2Q6ZUX7 228 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 UTS2BQ765I0 119 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 DOLPP1Q86YN1 238 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 ZNF101Q8IZC7 436 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR8H2Q8N162 312 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 GABRG1Q8N1C3 465 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 GDPD1Q8N9F7 314 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PLPP7Q8NBV4 271 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 C19orf18Q8NEA5 215 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR10AC1Q8NH08 325 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR2AE1Q8NHA4 323 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 SLC7A6Q92536 515 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 STARD4Q96DR4 205 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 BOD1Q96IK1 185 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 URM1Q9BTM9 101 aaKnown RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 PAPOLGQ9BWT3 736 aaKnown RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 C1QTNF5Q9BXJ0 243 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 BARHL1Q9BZE3 327 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 BCL2L14Q9BZR8 327 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 OR10A4Q9H209 315 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 TBCCD1Q9NVR7 557 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 NKIRAS2Q9NYR9 191 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PTTG3PQ9NZH4 202 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 PLEKHB1Q9UF11 243 aaPredicted RBP5.38□□□□□ -1.55
LIG3-206ENST00000586058 ZNF835Q9Y2P0 537 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 MYO7BQ6PIF6 2116 aa5.38□□□□□ -1.55
LIG3-206ENST00000586058 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 TRAV8-7A0A075B6U6 113 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 A0A0G2JNJ9 132 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 A0A1B0GUH1 482 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 hCG_38984A0A1B0GV85 526 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 A0A1W2PR80 420 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ISPDA4D126 451 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CENPXA8MT69 81 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 VSTM5A8MXK1 200 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 C16orf97H3BN30 126 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 M0R1B8 84 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CCL21O00585 134 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 CTDSP2O14595 271 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 KDM4BO94953 1096 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 BPNT1O95861 308 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 NRASP01111 189 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ALDOBP05062 364 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 SLC2A2P11168 524 aaPredicted RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 FAHP16930 419 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 ZNF14P17017 642 aaPredicted RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 ATF1P18846 271 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 AZGP1P25311 298 aaKnown RBP5.37□□□□□ -1.55
LIG3-206ENST00000586058 CHRNB4P30926 498 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 TNFSF8P32971 234 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 MNDAP41218 407 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 PITPNBP48739 271 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 POU3F4P49335 361 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 GSK3AP49840 483 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 RBP2P50120 134 aa5.37□□□□□ -1.55
LIG3-206ENST00000586058 FOXG1P55316 489 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms