RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 HIVEP2P31629 2446 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 CELSR1Q9NYQ6 3014 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 TMEM269A0A1B0GVZ9 245 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 ANXA2P2A6NMY6 339 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 MTRF1O75570 445 aaKnown RBP11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 GNAO1P09471 354 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 SLC2A1P11166 492 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 FAM3AP98173 230 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 MRPL28Q13084 256 aaKnown RBP11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 C6orf52Q5T4I8 152 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 FAM166AQ6J272 317 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 BHLHE23Q8NDY6 225 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 OR11L1Q8NGX0 322 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 CCL17Q92583 94 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 GTF3AQ92664 365 aaKnown RBP11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 TBX5Q99593 518 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 SNX5Q9Y5X3 404 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 NPTNQ9Y639 398 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 R4GMQ9 66 aa11.69□□□□□ -0.54
PRKCSH-202ENST00000585540 A8MV72 311 aaPredicted RBP11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 B4DSR2 109 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 LOC110117498-PIK3R3F6TDL0 507 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 H0YAE9 185 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 PSMD9O00233 223 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 MLNRO43193 412 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 CDC14BO60729 498 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 WBP4O75554 376 aaKnown RBP11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 IGHV4-31P0DP07 118 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 GNALP38405 381 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 MAP2K3P46734 347 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 ACTA2P62736 377 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 ACTG2P63267 376 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 ZNF91Q05481 1191 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 KRTAP1-1Q07627 177 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 RAB40BQ12829 278 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 KCNJ8Q15842 424 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 IZUMO2Q6UXV1 221 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 OR8B12Q8NGG6 310 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 CNIH3Q8TBE1 160 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 RNFT2Q96EX2 444 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 GSX1Q9H4S2 264 aaPredicted RBP11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 FN3KRPQ9HA64 309 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 GCM1Q9NP62 436 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 AMBNQ9NP70 447 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 RPL36Q9Y3U8 105 aaKnown RBP11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 ABCA1O95477 2261 aa11.68□□□□□ -0.54
PRKCSH-202ENST00000585540 C5orf63A6NC05 138 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 TMEM210A6NLX4 147 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 LYNX1G3V0Z9 82 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 FADS2O95864 444 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 CST4P01036 141 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 IGLV3-1P01715 115 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 LYNX1P0DP58 116 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 ZNF12P17014 697 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 MDH2P40926 338 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 GSK3AP49840 483 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 CDH15P55291 814 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 SMN1Q16637 294 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 SSX6Q7RTT6 188 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 ACBD7Q8N6N7 88 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 OR10H4Q8NGA5 316 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 OR10AD1Q8NGE0 317 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 CLDND2Q8NHS1 167 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 PBOV1Q9GZY1 135 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 VCX3BQ9H321 246 aa11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 EXOGQ9Y2C4 368 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.543e-11■■■■□ 23.2
PRKCSH-202ENST00000585540 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-202ENST00000585540 ZNF816-ZNF321PA0A0X1KG74 233 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 A0A1W2PQL4 384 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 H0YJX3 145 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 TMEM178BH3BS89 294 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 MAGEB4O15481 346 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 DHRS3O75911 302 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 HNF1AP20823 631 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 CA6P23280 308 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 DVL1P1P54792 670 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 PRSS12P56730 875 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 ISL1P61371 349 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 BTG1P62324 171 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 KLHL22Q53GT1 634 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 BCL2L15Q5TBC7 163 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 Q6ZSR3 168 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 ELMOD2Q8IZ81 293 aa11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
PRKCSH-202ENST00000585540 KLHL36Q8N4N3 616 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms