RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MESP1Q9BRJ9 268 aa10.36□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NUDT22Q9BRQ3 303 aa10.36□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ZNF426Q9BUY5 554 aa10.36□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MRM2Q9UI43 246 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-231ENST00000584063 KCNMB2Q9Y691 235 aa10.36□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CNOT1A5YKK6 2376 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 C10orf142B7Z368 130 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GABARAPH6UMI1 98 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 APOC3P02656 99 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 IFNGR1P15260 489 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ACHEP22303 614 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CCNOP22674 350 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MST1P26927 711 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CEACAM8P31997 349 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 AKR1C2P52895 323 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ART1P52961 327 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LTBQ06643 244 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MUC20Q8N307 709 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 KDM8Q8N371 416 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ZNF383Q8NA42 475 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR5T2Q8NGG2 359 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR14A16Q8NHC5 309 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CORO2AQ92828 525 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 WNT2BQ93097 391 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RNF166Q96A37 237 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TCTN2Q96GX1 697 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CYYR1Q96J86 154 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SYT4Q9H2B2 425 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 FARSAQ9Y285 508 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MCRIP1C9JLW8 97 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CD3DP04234 171 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GTF2F2P13984 249 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CCKBRP32239 447 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ARL3P36405 182 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 EFNA3P52797 238 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OVCH1Q7RTY7 1134 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PHOSPHO1Q8TCT1 267 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 CCDC74AQ96AQ1 378 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 C3orf49Q96BT1 292 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SEC22AQ96IW7 307 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC41A2Q96JW4 573 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 PRTFDC1Q9NRG1 225 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 UPB1Q9UBR1 384 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 BAIAP2Q9UQB8 552 aa10.35□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SIGLEC6O43699 453 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NMBP08949 121 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 RBM34P42696 430 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ULK3Q6PHR2 472 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MED25Q71SY5 747 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DNASE2BQ8WZ79 361 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NSMAFQ92636 917 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 TSLPQ969D9 159 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ICAM5Q9UMF0 924 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ELOA3DA6NLF2 546 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SOX15O60248 233 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 NKPD1Q17RQ9 610 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ELOA3BQ3SY89 546 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SLC35D3Q5M8T2 416 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 LINC01590Q5TEZ4 76 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ELP2Q6IA86 826 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ZNF627Q7L945 461 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ERASQ7Z444 233 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 YRDCQ86U90 279 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 DND1Q8IYX4 353 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 ELOA3Q8NG57 546 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 OR10A5Q9H207 317 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 GHRLQ9UBU3 117 aa10.34□□□□□ -0.75
CDK5RAP3-231ENST00000584063 SPTBN2O15020 2390 aa10.33□□□□□ -0.75
CDK5RAP3-231ENST00000584063 IGHV1OR21-1A0A087WYE8 117 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 A0A1W2PPV4 95 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ANKRD20A5PA0PJZ0 165 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TLCD2A6NGC4 264 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ATG12O94817 140 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NUDT14O95848 222 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 RLN2P04090 185 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 MELTFP08582 738 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CFHR1Q03591 330 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NHLRC3Q5JS37 347 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LINC00114Q6XXX2 140 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 LINC00696Q6ZRV3 163 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TMUB2Q71RG4 321 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 OR6V1Q8N148 313 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 ERGIC1Q969X5 290 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TMEM45BQ96B21 275 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DGAT2Q96PD7 388 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PRRT1Q99946 306 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 REG4Q9BYZ8 158 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GAREM1Q9H706 876 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 HAO2Q9NYQ3 351 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 CGGBP1Q9UFW8 167 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 PTPRZ1P23471 2315 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DCDC2BA2VCK2 349 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 SERINC4A6NH21 518 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 NPIPB9F8W1W9 429 aa10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 GSTZ1O43708 216 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-231ENST00000584063 DUX1O43812 170 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms