RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZNF275Q9NSD4 429 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ITGB1BP2Q9UKP3 347 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 V9GYS6 101 aa14.05□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SETD2Q9BYW2 2564 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 hCG_38984A0A1B0GV85 526 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF879B4DU55 563 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GABRPO00591 440 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MTRF1O75570 445 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GATBO75879 557 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DHRS3O75911 302 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RGS9O75916 674 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RAC2P15153 192 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF12P17014 697 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 THBS4P35443 961 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GSK3AP49840 483 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SNTB2Q13425 540 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TNK1Q13470 666 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 INSL4Q14641 139 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZNF718Q3SXZ3 478 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 Q499Y3 187 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SPATA46Q5T0L3 261 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RGS7BPQ6MZT1 257 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GDPGP1Q6ZNW5 385 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PGAP1Q75T13 922 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MRPL21Q7Z2W9 205 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CEACAM19Q7Z692 300 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 KLF14Q8TD94 323 aaPredicted RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 HAVCR1Q96D42 359 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PIK3IP1Q96FE7 263 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TRMT61AQ96FX7 289 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TMEM204Q9BSN7 226 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 NAA50Q9GZZ1 169 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SSR3Q9UNL2 185 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 DHDHQ9UQ10 334 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ATP23Q9Y6H3 246 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CEPT1Q9Y6K0 416 aa14.04□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TRBV5-7A0A0A0MS05 114 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PIN1P1O15428 100 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 AIREO43918 545 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 LMX1BO60663 402 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OCM2P0CE71 109 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FGF9P31371 208 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MAP2K3P46734 347 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SOX2P48431 317 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR8B8Q15620 311 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TIMM50Q3ZCQ8 353 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ZMAT1Q5H9K5 638 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 MBNL2Q5VZF2 373 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PAMR1Q6UXH9 720 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 SLC16A12Q6ZSM3 486 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CLVS1Q8IUQ0 354 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR13C3Q8NGS6 347 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 PHYHIPQ92561 330 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 FGGYQ96C11 551 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 OR14A2Q96R54 314 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 CHCHD6Q9BRQ6 235 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 TXNL4BQ9NX01 149 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 ENPP5Q9UJA9 477 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 RNF115Q9Y4L5 304 aa14.03□□□□□ -0.16
CDK5RAP3-228ENST00000583363 GGT3PA6NGU5 568 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 A6NHS1 94 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DHRS7CA6NNS2 312 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 E7EQL1 145 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PLAUP00749 431 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RAF1P04049 648 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF250P15622 560 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ACKR3P25106 362 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MPV17P39210 176 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DDOSTP39656 456 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FABP6P51161 128 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PRSS12P56730 875 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KRTAP10-9P60411 292 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RIPPLY1Q0D2K3 151 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PSG7Q13046 419 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MSMPQ1L6U9 139 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KRT74Q7RTS7 529 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SEMA6DQ8NFY4 1073 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KBTBD8Q8NFY9 601 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LILRB1Q8NHL6 650 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TSEN15Q8WW01 171 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RPL3LQ92901 407 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 C10orf35Q96D05 121 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 DERL3Q96Q80 235 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PPIL3Q9H2H8 161 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 EXOSC4Q9NPD3 245 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 BATF3Q9NR55 127 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NDUFA13Q9P0J0 144 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KCNN3Q9UGI6 736 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PIGLQ9Y2B2 252 aa14.02□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ANKHD1Q8IWZ3 2542 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LOC100506127A0A0U1RQW1 187 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SMIM31A0A1B0GVY4 71 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 A0A1W2PPK0 400 aa14.01□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CD300LBA8K4G0 201 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms