RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 RAD1O60671 282 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 SCELO95171 688 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 GPR1P46091 355 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 PRLHRP49683 370 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 SLC39A6Q13433 755 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 TFDP2Q14188 446 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 DMC1Q14565 340 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 RPEL1Q2QD12 228 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 WDR82Q6UXN9 313 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 FAM122BQ7Z309 247 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 TMEM105Q8N8V8 129 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 C19orf18Q8NEA5 215 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 OR4M1Q8NGD0 313 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 C18orf15Q96N68 181 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 GPR21Q99679 349 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 ANP32EQ9BTT0 268 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 ZNF442Q9H7R0 627 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 RABL2AQ9UBK7 228 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 DDX19BQ9UMR2 479 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 HES2Q9Y543 173 aa3.01□□□□□ -1.93
SMARCE1-219ENST00000583294 IGHV3-49A0A0A0MS15 119 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 NCF1BA6NI72 391 aaPredicted RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 NCF1CA8MVU1 366 aaPredicted RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 MAGEA1P43355 309 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 AP1S2P56377 157 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 PRR9Q5T870 116 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 PLCXD3Q63HM9 321 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 RWDD4Q6NW29 188 aaKnown RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 H3F3CQ6NXT2 135 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 OPN5Q6U736 354 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 TMCO2Q7Z6W1 182 aaPredicted RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 INO80EQ8NBZ0 244 aaPredicted RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 KCNS1Q96KK3 526 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 SCGB3A2Q96PL1 93 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 NAA50Q9GZZ1 169 aaKnown RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 CLSTN2Q9H4D0 955 aa3□□□□□ -1.93
SMARCE1-219ENST00000583294 C8orf33Q9H7E9 229 aaPredicted RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 FARSAQ9Y285 508 aaKnown RBP3□□□□□ -1.93
SMARCE1-219ENST00000583294 BTNL10A8MVZ5 291 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 TAAR5O14804 337 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 PLIN3O60664 434 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 MPDU1O75352 247 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 CYB5R3P00387 301 aaPredicted RBP2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 MT-ND4P03905 459 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 STAG3L3P0CL85 134 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 CD82P27701 267 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 DNAJC3Q13217 504 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 SLC25A35Q3KQZ1 300 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 RAB43Q86YS6 212 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 LYPD1Q8N2G4 141 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 KIF2BQ8N4N8 673 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 ITFG1Q8TB96 612 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 CDS1Q92903 461 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 PEX13Q92968 403 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 TOLLIPQ9H0E2 274 aa2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 DDX18Q9NVP1 670 aaKnown RBP2.99□□□□□ -1.93
SMARCE1-219ENST00000583294 TUBG1P23258 451 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 IFITM3Q01628 133 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 PIP5KL1Q5T9C9 394 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 OR2T5Q6IEZ7 315 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 GUSBP11Q6P575 273 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 CD300LGQ6UXG3 332 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 OTUD6AQ7L8S5 288 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 ZNF101Q8IZC7 436 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 CMTM8Q8IZV2 173 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 TRAM1L1Q8N609 369 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 MIR7-3HGQ8N6C7 128 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 OR2T29Q8NH02 315 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 GPX8Q8TED1 209 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 GLYATL2Q8WU03 294 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 ASZ1Q8WWH4 475 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 CPNE4Q96A23 557 aaPredicted RBP2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 OR4K3Q96R72 315 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 KCNS3Q9BQ31 491 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 NUDT9Q9BW91 350 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 TUBG2Q9NRH3 451 aa2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 RBFOX1Q9NWB1 397 aaKnown RBP2.98□□□□□ -1.93
SMARCE1-219ENST00000583294 HSBP1O75506 76 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 FARS2O95363 451 aaKnown RBP2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 CATP04040 527 aaKnown RBP2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 HSPD1P10809 573 aaKnown RBP2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 SFTPCP11686 197 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 CLDN18P56856 261 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 ATP6V0D1P61421 351 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 TMPRSS11AQ6ZMR5 421 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 DCAKDQ8WVC6 231 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 ISOC2Q96AB3 205 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 CSPG4P5Q96PW8 444 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 MARVELD1Q9BSK0 173 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 CHCHD7Q9BUK0 85 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 DEFB129Q9H1M3 183 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 CD209Q9NNX6 404 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 FBXO8Q9NRD0 319 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 RHBDD3Q9Y3P4 386 aa2.97□□□□□ -1.93
SMARCE1-219ENST00000583294 BRCA1P38398 1863 aaKnown RBP2.96□□□□□ -1.93
SMARCE1-219ENST00000583294 A0A1B0GTQ1 180 aa2.96□□□□□ -1.94
SMARCE1-219ENST00000583294 A0A1B0GUH1 482 aa2.96□□□□□ -1.94
SMARCE1-219ENST00000583294 M0R1X1 148 aa2.96□□□□□ -1.94
SMARCE1-219ENST00000583294 GATBO75879 557 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms