RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GINS1Q14691 196 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 ZBTB46Q86UZ6 589 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 GLB1L2Q8IW92 636 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 BHLHE23Q8NDY6 225 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 SSMEM1Q8WWF3 244 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 DYRK2Q92630 601 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 GABARAPL3Q9BY60 117 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 TMEM100Q9NV29 134 aa11.26□□□□□ -0.61
SS18-222ENST00000582792 COA3Q9Y2R0 106 aaPredicted RBP11.26□□□□□ -0.61
SS18-222ENST00000582792 CENPVL3A0A0U1RRI6 287 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 ZNF879B4DU55 563 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 RRP9O43818 475 aaKnown RBP11.25□□□□□ -0.61
SS18-222ENST00000582792 LIPFP07098 398 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 SFTPBP07988 381 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 IRF2P14316 349 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 MMP9P14780 707 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 NPY4RP50391 375 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 RAD23AP54725 363 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 MAB21L1Q13394 359 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 RCN1Q15293 331 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 TAF9Q16594 264 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 CD276Q5ZPR3 534 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 ZBTB49Q6ZSB9 765 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 SLC37A3Q8NCC5 494 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 OR4K13Q8NH42 304 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 TBC1D15Q8TC07 691 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 Q8TCH9 128 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 ERGIC1Q969X5 290 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 TBX15Q96SF7 602 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 NMNAT3Q96T66 252 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 CIB1Q99828 191 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 PRRG3Q9BZD7 231 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 SYT4Q9H2B2 425 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 ACOXLQ9NUZ1 547 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 B9D1Q9UPM9 204 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
SS18-222ENST00000582792 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 OR6C68A6NDL8 312 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 SLC22A31A6NKX4 558 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 RIIAD1A6NNX1 92 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 ZAR1LA6NP61 321 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 E9PQ18 207 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 EI24O14681 340 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
SS18-222ENST00000582792 GPR137BO60478 399 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 SLC16A7O60669 478 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 TOX4O94842 621 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HLA-DPB1P04440 258 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 ZNF3P17036 446 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 POU1F1P28069 291 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 CENPAP49450 140 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 PROK1P58294 105 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 PTGES3Q15185 160 aaKnown RBP11.24□□□□□ -0.61
SS18-222ENST00000582792 KCNMB1Q16558 191 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 SLC35F1Q5T1Q4 408 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 SLX4IPQ5VYV7 408 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HIST2H3AQ71DI3 136 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 CBR4Q8N4T8 237 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 C19orf18Q8NEA5 215 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 SDR9C7Q8NEX9 313 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 OR11L1Q8NGX0 322 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 EME1Q96AY2 570 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 RDH12Q96NR8 316 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 TECTBQ96PL2 329 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 COQ7Q99807 217 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HCAR1Q9BXC0 346 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 NMNAT2Q9BZQ4 307 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 NUAK2Q9H093 628 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 RERGLQ9H628 205 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 WDR76Q9H967 626 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 ERVK-18Q9QC07 812 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
SS18-222ENST00000582792 MITFO75030 526 aaPredicted RBP11.23□□□□□ -0.61
SS18-222ENST00000582792 FAM20BO75063 409 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 TSPAN15O95858 294 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 PAICSP22234 425 aaKnown RBP11.23□□□□□ -0.61
SS18-222ENST00000582792 CD200P41217 278 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 BLVRAP53004 296 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 C12orf73Q69YU5 71 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 C1QL4Q86Z23 238 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 OR6V1Q8N148 313 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 IQCF1Q8N6M8 205 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 GJC3Q8NFK1 279 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 WDFY2Q96P53 400 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 FN3KQ9H479 309 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 POLR1DQ9Y2S0 133 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 ZNF281Q9Y2X9 895 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
SS18-222ENST00000582792 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
SS18-222ENST00000582792 H0YHG0 523 aa11.22□□□□□ -0.61
SS18-222ENST00000582792 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms