RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 B9D1Q9UPM9 204 aa10.36□□□□□ -0.75
SS18-219ENST00000581570 CAPN7Q9Y6W3 813 aa10.36□□□□□ -0.75
SS18-219ENST00000581570 IGLV1-36A0A0B4J1U3 117 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 M0R135 149 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 CHST1O43916 411 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 PTP4A3O75365 173 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 FAHP16930 419 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 PAX6P26367 422 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 MSX2P35548 267 aaPredicted RBP10.35□□□□□ -0.75
SS18-219ENST00000581570 SELENOWP63302 87 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 BLMHQ13867 455 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 HABP2Q14520 560 aaPredicted RBP10.35□□□□□ -0.75
SS18-219ENST00000581570 AANATQ16613 207 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 SNAI3Q3KNW1 292 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 SLC36A3Q495N2 470 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 ERICH5Q6P6B1 374 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 LIAT1Q6ZQX7 453 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 LNX2Q8N448 690 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 PAPD5Q8NDF8 572 aaKnown RBP10.35□□□□□ -0.75
SS18-219ENST00000581570 SLC26A10Q8NG04 563 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 OR5T2Q8NGG2 359 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 OR9Q1Q8NGQ5 310 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 SEH1LQ96EE3 360 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 ZNF799Q96GE5 643 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 AJUBAQ96IF1 538 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 GPX7Q96SL4 187 aaPredicted RBP10.35□□□□□ -0.75
SS18-219ENST00000581570 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 PNRC2Q9NPJ4 139 aaKnown RBP10.35□□□□□ -0.75
SS18-219ENST00000581570 SNX13Q9Y5W8 968 aa10.35□□□□□ -0.75
SS18-219ENST00000581570 A0A1W2PQ09 198 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 MEGF11A6BM72 1044 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 FFAR1O14842 300 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 IFNW1P05000 195 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 SELLP14151 372 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 AMY2BP19961 511 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 POU1F1P28069 291 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 NAA10P41227 235 aaPredicted RBP10.34□□□□□ -0.75
SS18-219ENST00000581570 RPS6KA3P51812 740 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 BMXP51813 675 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 RFX4Q33E94 735 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 GLYATL3Q5SZD4 288 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
SS18-219ENST00000581570 HCP5Q6MZN7 132 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 DPY19L4Q7Z388 723 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 OR6V1Q8N148 313 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 OR56B2PQ8NGI1 322 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 OR8S1Q8NH09 359 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 SPTSSAQ969W0 71 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 C12orf43Q96C57 262 aaKnown RBP10.34□□□□□ -0.75
SS18-219ENST00000581570 PARD6BQ9BYG5 372 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.34□□□□□ -0.75
SS18-219ENST00000581570 CYB5R1Q9UHQ9 305 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 SIGLEC7Q9Y286 467 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 TMEM5Q9Y2B1 443 aa10.34□□□□□ -0.75
SS18-219ENST00000581570 V9GYY5 206 aaPredicted RBP10.34□□□□□ -0.75
SS18-219ENST00000581570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
SS18-219ENST00000581570 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 PEX14O75381 377 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 TXNDC12O95881 172 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 GSK3BP49841 420 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 KRTAP10-11P60412 298 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 CSNK2BP67870 215 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 STUMQ69YW2 141 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 DPY19L2P2Q6ZN68 376 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 WDR86Q86TI4 376 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 Q8N2B8 174 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 OR1M1Q8NGA1 313 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 OR5D13Q8NGL4 314 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 WIPF2Q8TF74 440 aaPredicted RBP10.33□□□□□ -0.76
SS18-219ENST00000581570 DUS3LQ96G46 650 aaKnown RBP10.33□□□□□ -0.76
SS18-219ENST00000581570 FAM46AQ96IP4 442 aaKnown RBP10.33□□□□□ -0.76
SS18-219ENST00000581570 DDOQ99489 341 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 B9D2Q9BPU9 175 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 ZNF391Q9UJN7 358 aa10.33□□□□□ -0.76
SS18-219ENST00000581570 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 NKX6-3A6NJ46 265 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 H0YAE9 185 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 RENP00797 406 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 HLA-DQA2P01906 255 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 NDUFB7P17568 137 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 ANOS1P23352 680 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 DDOSTP39656 456 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 GMFBP60983 142 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 VTCN1Q7Z7D3 282 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 TLCD1Q96CP7 247 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 MED30Q96HR3 178 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 MAP6Q96JE9 813 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 OR5M11Q96RB7 305 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 WNT10AQ9GZT5 417 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 NSRP1Q9H0G5 558 aaKnown RBP10.32□□□□□ -0.76
SS18-219ENST00000581570 DNTTIP1Q9H147 329 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 SNTG1Q9NSN8 517 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 HAO2Q9NYQ3 351 aa10.32□□□□□ -0.76
SS18-219ENST00000581570 SLC25A10Q9UBX3 287 aaPredicted RBP10.32□□□□□ -0.76
SS18-219ENST00000581570 N6AMT1Q9Y5N5 214 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms