RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ZNF684Q5T5D7 378 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 LPCAT4Q643R3 524 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 ENTHD1Q8IYW4 607 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 LINC01356Q8N9X3 169 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 SPERTQ8NA61 448 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 RHOXF1Q8NHV9 184 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 ZNF420Q8TAQ5 688 aaPredicted RBP16.28■□□□□ 0.2
SS18-208ENST00000577751 ITFG2Q969R8 447 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 POM121Q96HA1 1249 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 ADAT1Q9BUB4 502 aaKnown RBP16.28■□□□□ 0.2
SS18-208ENST00000577751 PBOV1Q9GZY1 135 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 C2CD3Q4AC94 2353 aa16.28■□□□□ 0.2
SS18-208ENST00000577751 NIPBLQ6KC79 2804 aaeCLIP16.27■□□□□ 0.2
SS18-208ENST00000577751 ANKRD30BLA7E2S9 258 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 FAM157AC9JC47 383 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 J3QRE1 110 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 MPZL2O60487 215 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 LMX1BO60663 402 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 CRLF1O75462 422 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 APOL3O95236 402 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 TGFAP01135 160 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 ATP6V1E1P36543 226 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 ZNF829Q3KNS6 432 aaPredicted RBP16.27■□□□□ 0.2
SS18-208ENST00000577751 FAM166AQ6J272 317 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 KRT74Q7RTS7 529 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 MOGAT3Q86VF5 341 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 LRRC28Q86X40 367 aaPredicted RBP16.27■□□□□ 0.2
SS18-208ENST00000577751 PACRGLQ8N7B6 248 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 PLPP7Q8NBV4 271 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 CSNK2A3Q8NEV1 391 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 Q8TCH9 128 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 TBX5Q99593 518 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 ZNF665Q9H7R5 613 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 G6PC2Q9NQR9 355 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 AASSQ9UDR5 926 aa16.27■□□□□ 0.2
SS18-208ENST00000577751 NUFIP1Q9UHK0 495 aaKnown RBP16.27■□□□□ 0.2
SS18-208ENST00000577751 IGHV3-64DA0A0J9YX35 117 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 B4DSR2 109 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 CASQ2O14958 399 aaPredicted RBP16.26■□□□□ 0.19
SS18-208ENST00000577751 IGHV2-5P01817 119 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 ACKR3P25106 362 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 PEX2P28328 305 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 ZNF85Q03923 595 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 MFGE8Q08431 387 aaPredicted RBP16.26■□□□□ 0.19
SS18-208ENST00000577751 MPPED2Q15777 294 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 SNCBQ16143 134 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 LRRC36Q1X8D7 754 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 TMEM155Q4W5P6 130 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 GALNT4Q8N4A0 578 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 OR10H4Q8NGA5 316 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 PPP1R14AQ96A00 147 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 RNFT2Q96EX2 444 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 RHBDD3Q9Y3P4 386 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 R4GMQ9 66 aa16.26■□□□□ 0.19
SS18-208ENST00000577751 SONP18583 2426 aaKnown RBP16.26■□□□□ 0.19
SS18-208ENST00000577751 SNTNA6NMZ2 147 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 SULT1C4O75897 302 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 FSTL3O95633 263 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 TTRP02766 147 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 BTG1P62324 171 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 ZMYND11Q15326 602 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 PRAMEF6Q5VXH4 476 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 FTMTQ8N4E7 242 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 ZNF555Q8NEP9 628 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 DVL3Q92997 716 aaPredicted RBP16.25■□□□□ 0.19
SS18-208ENST00000577751 RAB39BQ96DA2 213 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 PPP1R3EQ9H7J1 279 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 MOB1AQ9H8S9 216 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 KCNS2Q9ULS6 477 aa16.25■□□□□ 0.19
SS18-208ENST00000577751 EXOGQ9Y2C4 368 aaKnown RBP16.25■□□□□ 0.19
SS18-208ENST00000577751 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 METTL15A6NJ78 407 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 LRRC30A6NM36 301 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 LOC110117498-PIK3R3F6TDL0 507 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 CYB5R3P00387 301 aaPredicted RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 CST4P01036 141 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 KRT8P05787 483 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 ATP6V1B1P15313 513 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 DVL1P1P54792 670 aaPredicted RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 ISL1P61371 349 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 ELF3P78545 371 aaPredicted RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 MZT1Q08AG7 82 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 OGFRL1Q5TC84 451 aaPredicted RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 LIPNQ5VXI9 398 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 PLEKHG7Q6ZR37 379 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 ELMOD2Q8IZ81 293 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 OR51E1Q8TCB6 317 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 Q96MT0 163 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 GAL3ST1Q99999 423 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 DCLRE1BQ9H816 532 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 C14orf119Q9NWQ9 140 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 MPC1Q9Y5U8 109 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 SNX5Q9Y5X3 404 aa16.24■□□□□ 0.19
SS18-208ENST00000577751 ANK3Q12955 4377 aaKnown RBP16.24■□□□□ 0.19
SS18-208ENST00000577751 ISPDA4D126 451 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 FAM20BO75063 409 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 MSMBP08118 114 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 MDH2P40926 338 aaKnown RBP16.23■□□□□ 0.19
SS18-208ENST00000577751 MAP2K3P46734 347 aa16.23■□□□□ 0.19
SS18-208ENST00000577751 ACTC1P68032 377 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms