RNA–Protein interactions for RNA: ENST00000575927.1

CYCSP40-201, Transcript of cytochrome c, somatic pseudogene 40, humanhuman

BASIC

Gene CYCSP40, Length 294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP40-201ENST00000575927 CXCL13O43927 109 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SSX5O60225 188 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CRTAPO75718 401 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 IL2RAP01589 272 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 HLA-AP01891 365 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SERPINA7P05543 415 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CST2P09228 141 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 RPA2P15927 270 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 HIST1H1DP16402 221 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 GNB3P16520 340 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ZNF24P17028 368 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 NAT1P18440 290 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 POU3F2P20265 443 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 GDF1P27539 372 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 S100A11P31949 105 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OTX1P32242 354 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CD96P40200 585 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 MPLP40238 635 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CASRP41180 1078 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 H2BFSP57053 126 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 B3GALT5-AS1P59052 145 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 RPS27AP62979 156 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CXADRP78310 365 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SORDQ00796 357 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OC90Q02509 493 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SRSF4Q08170 494 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 FGL1Q08830 312 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ARFRP1Q13795 201 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 GK2Q14410 553 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CNN3Q15417 329 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LPAL2Q16609 132 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CLVS2Q5SYC1 327 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ZNF468Q5VIY5 522 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 FAM27BQ5VT28 67 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 DCAF12L2Q5VW00 463 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 B3GNTL1Q67FW5 361 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ABLIM2Q6H8Q1 611 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LIN54Q6MZP7 749 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 H3F3CQ6NXT2 135 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 FAHD2BQ6P2I3 314 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 Q6ZSR3 168 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 TMUB2Q71RG4 321 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 RAB11FIP2Q7L804 512 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 AAED1Q7RTV5 226 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CD163Q86VB7 1156 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SLC25A42Q86VD7 318 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 COMMD7Q86VX2 200 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 NAXDQ8IW45 347 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 GPR137CQ8N3F9 429 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LRRC18Q8N456 261 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ARRDC1Q8N5I2 433 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ZIC4Q8N9L1 334 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR4S1Q8NGB4 309 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR5M8Q8NGP6 311 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR13C8Q8NGS7 320 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR5H2Q8NGV7 314 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR4K15Q8NH41 348 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR2V1Q8NHB1 315 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CPT1CQ8TCG5 803 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 PP6455Q8WZ26 134 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 MARVELD3Q96A59 401 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 WDR89Q96FK6 387 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ZNF799Q96GE5 643 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 FAHD2AQ96GK7 314 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LIN37Q96GY3 246 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 C1orf147Q96MC9 270 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SCGB3A2Q96PL1 93 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SPACA5Q96QH8 159 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 TAAR9Q96RI9 348 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 S100A13Q99584 98 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 NICN1Q9BSH3 213 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 DDA1Q9BW61 102 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 GSX2Q9BZM3 304 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 CHST5Q9GZS9 411 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 OR10A2Q9H208 303 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 SMOC1Q9H4F8 434 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 BANF2Q9H503 90 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 PLEK2Q9NYT0 353 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 COMMD9Q9P000 198 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ABI3Q9P2A4 366 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 KIF25Q9UIL4 384 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 ANAPC10Q9UM13 185 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 BOKQ9UMX3 212 aaPredicted RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 VSIG4Q9Y279 399 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 MRPS18CQ9Y3D5 142 aaKnown RBP4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 PCDHGA1Q9Y5H4 931 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 LAMA3Q16787 3333 aa4.29□□□□□ -1.72
CYCSP40-201ENST00000575927 TNRC6AQ8NDV7 1962 aaKnown RBP4.28□□□□□ -1.72
CYCSP40-201ENST00000575927 LOC100509620A0A075B734 347 aa4.28□□□□□ -1.72
CYCSP40-201ENST00000575927 CCDC187A0A096LP49 1063 aa4.28□□□□□ -1.72
CYCSP40-201ENST00000575927 A0A0A6YYD4 124 aa4.28□□□□□ -1.72
CYCSP40-201ENST00000575927 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
CYCSP40-201ENST00000575927 A0A0D9SG52 128 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms