RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SPARTQ8N0X7 666 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 OR8G5Q8NG78 346 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 FCGR1BQ92637 280 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 FAM71F1Q96KD3 344 aaPredicted RBP14.6□□□□□ -0.07
NUP88-210ENST00000574867 OR5M11Q96RB7 305 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 MS4A5Q9H3V2 200 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 ISYNA1Q9NPH2 558 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 ACOT13Q9NPJ3 140 aa14.6□□□□□ -0.07
NUP88-210ENST00000574867 MRPL15Q9P015 296 aaKnown RBP14.6□□□□□ -0.07
NUP88-210ENST00000574867 ABCA12Q86UK0 2595 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 A0A1B0GTI1 187 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 H7C417 338 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 SYT7O43581 403 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 ZFPL1O95159 310 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 CD53P19397 219 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 ACHEP22303 614 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 ALDH3B1P43353 468 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 MAP2K4P45985 399 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 MAP2K3P46734 347 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 PRSS12P56730 875 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 ALKBH6Q3KRA9 238 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 ZBTB37Q5TC79 503 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 BHLHE23Q8NDY6 225 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 NRGNQ92686 78 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 CACNG6Q9BXT2 260 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 LIME1Q9H400 295 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 NOP16Q9Y3C1 178 aaKnown RBP14.59□□□□□ -0.07
NUP88-210ENST00000574867 EMX1Q04741 257 aaPredicted RBP14.59□□□□□ -0.07
NUP88-210ENST00000574867 DMKNQ6E0U4 476 aaPredicted RBP14.59□□□□□ -0.07
NUP88-210ENST00000574867 OR5AS1Q8N127 324 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 NINJ1Q92982 152 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 SLC22A4Q9H015 551 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 HHLA2Q9UM44 414 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 V9GYS6 101 aa14.59□□□□□ -0.07
NUP88-210ENST00000574867 OVOL3O00110 214 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 CD1AP06126 327 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 ZNF81P51508 661 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 TNK1Q13470 666 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 TSPAN14Q8NG11 270 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 DIRC2Q96SL1 478 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 PDCD1LG2Q9BQ51 273 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 SLC30A2Q9BRI3 323 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 SOX7Q9BT81 388 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 PLEKHA1Q9HB21 404 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 CACNA1DQ01668 2161 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 ARFGEF3Q5TH69 2177 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 NBPF19A0A087WUL8 3843 aa14.58□□□□□ -0.08
NUP88-210ENST00000574867 A0A087WXM4 84 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ANKRD30BLA7E2S9 258 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 PLPP2O43688 288 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ERCC1P07992 297 aaPredicted RBP14.57□□□□□ -0.08
NUP88-210ENST00000574867 ADH4P08319 380 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 PCMT1P22061 227 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 DNASE1P24855 282 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ACKR3P25106 362 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 RIPPLY1Q0D2K3 151 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 MLLT11Q13015 90 aaPredicted RBP14.57□□□□□ -0.08
NUP88-210ENST00000574867 DOC2BQ14184 412 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 OR13G1Q8NGZ3 307 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ZDHHC8Q9ULC8 765 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 PLEKHA6Q9Y2H5 1048 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 SIRT4Q9Y6E7 314 aaPredicted RBP14.57□□□□□ -0.08
NUP88-210ENST00000574867 APCP25054 2843 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 AKAP6Q13023 2319 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ZNF816-ZNF321PA0A0X1KG74 233 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 A0A1B0GWJ7 208 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ZSCAN5BA6NJL1 495 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 C17orf100A8MU93 164 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 NAT2P11245 290 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 CELP19835 753 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 PCGF3Q3KNV8 242 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 UBE2UQ5VVX9 321 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 KRT74Q7RTS7 529 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 RDH10Q8IZV5 341 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ZFP41Q8N8Y5 198 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 OR14K1Q8NGZ2 314 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 UFD1Q92890 307 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 C10orf35Q96D05 121 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 PGLYRP3Q96LB9 341 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 MGLLQ99685 303 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 MSL2Q9HCI7 577 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ABCB9Q9NP78 766 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 TMEM100Q9NV29 134 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 ENPP5Q9UJA9 477 aa14.57□□□□□ -0.08
NUP88-210ENST00000574867 HSMCR30P0CW71 290 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 GNALP38405 381 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 SLC3A1Q07837 685 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 GPR50Q13585 617 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 Q6ZR03 302 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 GHSRQ92847 366 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 RAB1BQ9H0U4 201 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 VCX3AQ9NNX9 186 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 BEX4Q9NWD9 120 aaPredicted RBP14.56□□□□□ -0.08
NUP88-210ENST00000574867 NKIRAS2Q9NYR9 191 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 PIGLQ9Y2B2 252 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 ZNF281Q9Y2X9 895 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 LRBAP50851 2863 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 LILRA1O75019 489 aa14.56□□□□□ -0.08
NUP88-210ENST00000574867 CST4P01036 141 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms