RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 A0A1W2PQU0 124 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SLC16A7O60669 478 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 UPK3AO75631 287 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 NGFRP08138 427 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 KHDC3LQ587J8 217 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SLC22A18ASQ8N1D0 253 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 OR52R1Q8NGF1 315 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 OR52E1Q8NGJ3 308 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 LRFN5Q96NI6 719 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SPACA5Q96QH8 159 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 RAB11FIP5Q9BXF6 653 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 PDE7BQ9NP56 450 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SLC2A4RGQ9NR83 387 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SLC17A5Q9NRA2 495 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CYTL1Q9NRR1 136 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 UBQLN4Q9NRR5 601 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 DUSP22Q9NRW4 184 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 C19orf12Q9NSK7 152 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 TBC1D29Q9UFV1 150 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 ADH1BP00325 375 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CD5P06127 495 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SNRPCP09234 159 aaKnown RBP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CTHP32929 405 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CHRFAM7AQ494W8 412 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 CLEC18BQ6UXF7 455 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 SPNS3Q6ZMD2 512 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 BIVMQ86UB2 503 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
CCDC40-212ENST00000574799 PLPP5Q8NEB5 264 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 PTGES2Q9H7Z7 377 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 Q9N2J8 555 aa8.56□□□□□ -1.04
CCDC40-212ENST00000574799 TRBV5-5A0A0J9YX44 114 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 METTL12A8MUP2 240 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 XRCC2O43543 280 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF20P17024 532 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 IDH3GP51553 393 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 GGTLC2Q14390 218 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SLC22A25Q6T423 547 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 KLHL24Q6TFL4 600 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SMRP1Q8NCR6 262 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 CES1P1Q9UKY3 287 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 RAB22AQ9UL26 194 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 F5P12259 2224 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 HCKP08631 526 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 FCGR3AP08637 254 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 OMGP23515 440 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ACTR1BP42025 376 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 PNLIPRP3Q17RR3 467 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ABCA11PQ4W5N1 156 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 HAS2Q92819 552 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 TOMM40LQ969M1 308 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 MRGPRX1Q96LB2 322 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF681Q96N22 645 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 TAAR9Q96RI9 348 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 G6PC3Q9BUM1 346 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SRMSQ9H3Y6 488 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 RAB18Q9NP72 206 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SIRT7Q9NRC8 400 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 C19orf53Q9UNZ5 99 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 B9D1Q9UPM9 204 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 MRPS18BQ9Y676 258 aaKnown RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 LOC390937A0A1W2PQ73 354 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SLC33A1O00400 549 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ARPC3O15145 178 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 TNFSF12O43508 249 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 MDKP21741 143 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ASCL1P50553 236 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 ZNF705AQ6ZN79 300 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SGPP2Q8IWX5 399 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 SLC43A2Q8N370 569 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 OR10C1Q96KK4 312 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 MRPL22Q9NWU5 206 aaKnown RBP8.55□□□□□ -1.04
CCDC40-212ENST00000574799 DNAJB11Q9UBS4 358 aa8.55□□□□□ -1.04
CCDC40-212ENST00000574799 P2RY10O00398 339 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 DIRAS3O95661 229 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 PTBP3O95758 552 aaKnown RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 APODP05090 189 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 CRABP1P29762 137 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 RPS23P62266 143 aaKnown RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SLC35A1P78382 337 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 OR4N2Q8NGD1 307 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 OR1E3Q8WZA6 343 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 FGGYQ96C11 551 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 APOOQ9BUR5 198 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 TUBA4BQ9H853 241 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 PHPT1Q9NRX4 125 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 TMEM269A0A1B0GVZ9 245 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SFT2D2O95562 160 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 MMP7P09237 267 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 GLRA1P23415 457 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 FBXW4P57775 412 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 VAMP2P63027 116 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 RPS21P63220 83 aaKnown RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SGCGQ13326 291 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 SLC17A1Q14916 467 aa8.54□□□□□ -1.04
CCDC40-212ENST00000574799 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-212ENST00000574799 BTNL8Q6UX41 500 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms