RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CLIC3O95833 236 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 SERPINA5P05154 406 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 HMGN2P05204 90 aaKnown RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 CHRM4P08173 479 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CD55P08174 381 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 FBP1P09467 338 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 PATE4P0C8F1 98 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ATP6V1B1P15313 513 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 MATN1P21941 496 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 PRKACGP22612 351 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CBLP22681 906 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CRHBPP24387 322 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 RRM2P31350 389 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 PITPNBP48739 271 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CRISP3P54108 245 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 UCP2P55851 309 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 TNFAIP6P98066 277 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 FUT5Q11128 374 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 PMS2P3Q13401 168 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 TP53BP2Q13625 1128 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 LASP1Q14847 261 aaKnown RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 DUSP7Q16829 419 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 MICAQ29983 383 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ZIK1Q3SY52 487 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 TMEM255AQ5JRV8 349 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 PHYHD1Q5SRE7 291 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 C6orf141Q5SZD1 244 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 GPR139Q6DWJ6 353 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 LAIR2Q6ISS4 152 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 TNFAIP8L2Q6P589 184 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 LYPD4Q6UWN0 246 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 LINC00114Q6XXX2 140 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ZNF813Q6ZN06 617 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CCDC28AQ8IWP9 274 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 KDM8Q8N371 416 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 SETD9Q8NE22 299 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 SLC30A7Q8NEW0 376 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 OR8B3Q8NGG8 313 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 OR5R1Q8NH85 324 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 GIPC3Q8TF64 312 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 NSMAFQ92636 917 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 HRASLS5Q96KN8 279 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 WDFY2Q96P53 400 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 TRNT1Q96Q11 434 aaKnown RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 OR8B2Q96RD0 313 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 MYCBPQ99417 103 aaPredicted RBP5.63□□□□□ -1.51
CHD3-213ENST00000571249 STACQ99469 402 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ARHGDIGQ99819 225 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 RNF121Q9H920 327 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CDH20Q9HBT6 801 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CLN8Q9UBY8 286 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 MIOXQ9UGB7 285 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 ENOPH1Q9UHY7 261 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 KCNE5Q9UJ90 142 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 KCNG2Q9UJ96 466 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 OSGIN1Q9UJX0 560 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 FBXL3Q9UKT7 428 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 CHST2Q9Y4C5 530 aa5.63□□□□□ -1.51
CHD3-213ENST00000571249 APOBP04114 4563 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 A0A087WWL8 130 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 FFAR1O14842 300 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 MITFO75030 526 aaPredicted RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 DIRAS1O95057 198 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 UBL3O95164 117 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 GASTP01350 101 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 BCHEP06276 602 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 ADH4P08319 380 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 NR2F1P10589 423 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 B4GALT1P15291 398 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 AQP1P29972 269 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 ATP6V1E1P36543 226 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 MPV17P39210 176 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 IDH2P48735 452 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 POLR2HP52434 150 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 SMIM11AP58511 58 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 CSNK2BP67870 215 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 RPP30P78346 268 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 CD47Q08722 323 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 PPP1R8Q12972 351 aaKnown RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 SEC23BQ15437 767 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 LY6EQ16553 131 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 SYPL1Q16563 259 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 ZBED5Q49AG3 693 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 METTL11BQ5VVY1 283 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 WDR25Q64LD2 544 aaPredicted RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 ZNF770Q6IQ21 691 aaPredicted RBP5.62□□□□□ -1.51
CHD3-213ENST00000571249 ZNF773Q6PK81 442 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 DHRS4L2Q6PKH6 230 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 UNQ9370/PRO34162Q6UXP9 181 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 CD300LDQ6UXZ3 194 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 OFCC1Q8IZS5 231 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 LINC00471Q8N535 108 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 OR10G2Q8NGC3 310 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 OR1J1Q8NGS3 322 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 FGFBP3Q8TAT2 258 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 XAGE5Q8WWM1 108 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 OR7D2Q96RA2 312 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 BCL2L14Q9BZR8 327 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 SLC38A1Q9H2H9 487 aa5.62□□□□□ -1.51
CHD3-213ENST00000571249 DUSP21Q9H596 190 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms