RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 IL33O95760 270 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 HOXC4P09017 264 aaPredicted RBP13.7□□□□□ -0.22
SMG6-207ENST00000570756 ZNF708P17019 499 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 OR3A2P47893 321 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 P2RY4P51582 365 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 TMEM33P57088 247 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
SMG6-207ENST00000570756 Q3ZCU0 254 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 ZNF776Q68DI1 518 aaPredicted RBP13.7□□□□□ -0.22
SMG6-207ENST00000570756 POMZP3Q6PJE2 187 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 DCXRQ7Z4W1 244 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 OR5D14Q8NGL3 314 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 OR2I1PQ8NGU4 316 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 CD300LFQ8TDQ1 290 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 ELSPBP1Q96BH3 223 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 ZDHHC12Q96GR4 267 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 SLC35B3Q9H1N7 401 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 C1orf123Q9NWV4 160 aa13.7□□□□□ -0.22
SMG6-207ENST00000570756 A0A1W2PPE2 198 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 HIST1H1DP16402 221 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 SRSF5Q13243 272 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 IAH1Q2TAA2 248 aaPredicted RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 C2orf27AQ580R0 203 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 LHFPL1Q86WI0 220 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 ARHGEF39Q8N4T4 335 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 SNIP1Q8TAD8 396 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 RHBDD1Q8TEB9 315 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 NICN1Q9BSH3 213 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 PTGES2Q9H7Z7 377 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 FREM3P0C091 2139 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 A6NCN8 305 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 NME2P1O60361 137 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 DEDDO75618 318 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 H2BFMP0C1H6 154 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 SEC11BP0C7V7 166 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 DANCRP0C864 163 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 AMY2BP19961 511 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 CTNNB1P35222 781 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 THBS4P35443 961 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 ZNF93P35789 620 aaPredicted RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 MMP16P51512 607 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 FAM78AQ5JUQ0 283 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 DNM1P34Q6PK57 102 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 OOSP2Q86WS3 158 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 EMG1Q92979 244 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 ZNF524Q96C55 264 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 DNAJA3Q96EY1 480 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 SPSB2Q99619 263 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 PRRX2Q99811 253 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 LPAR5Q9H1C0 372 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 PLEKHA2Q9HB19 425 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 GFOD1Q9NXC2 390 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 GAR1Q9NY12 217 aaKnown RBP13.69□□□□□ -0.22
SMG6-207ENST00000570756 AMDHD2Q9Y303 409 aa13.69□□□□□ -0.22
SMG6-207ENST00000570756 BORCS7-ASMTA0A0B4J1R7 106 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 SYT7O43581 403 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 OR2C1O95371 312 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 IGHMP01871 453 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 KLK3P07288 261 aaPredicted RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 CAMLGP49069 296 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 TAS2R46P59540 309 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 RAP1AP62834 184 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 SURF2Q15527 256 aaPredicted RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 PYY3Q5JQD4 70 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 C1QL3Q5VWW1 255 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 HEPN1Q6WQI6 88 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 FNDC9Q8TBE3 224 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 ADAMTS18Q8TE60 1221 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 HRASLS2Q9NWW9 162 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 B3GALT5Q9Y2C3 310 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 FAM221BA6H8Z2 402 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 ZNF354AO60765 605 aaPredicted RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 MPZL1O95297 269 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 RPS2P15880 293 aaKnown RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 ITGA3P26006 1051 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 NFATC4Q14934 902 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 OR13G1Q8NGZ3 307 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 KCNG3Q8TAE7 436 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 ST7LQ8TDW4 575 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 TSACCQ96A04 125 aaPredicted RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 WDR92Q96MX6 357 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 CHST5Q9GZS9 411 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 PARPBPQ9NWS1 579 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 C14orf166Q9Y224 244 aaKnown RBP13.68□□□□□ -0.22
SMG6-207ENST00000570756 OSGIN2Q9Y236 505 aa13.68□□□□□ -0.22
SMG6-207ENST00000570756 HCRTR2O43614 444 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 DXOO77932 396 aaKnown RBP13.67□□□□□ -0.22
SMG6-207ENST00000570756 YIF1AO95070 293 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 MPIG6BO95866 241 aa13.67□□□□□ -0.22
SMG6-207ENST00000570756 CHATP28329 748 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms