RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ZNF593O00488 134 aaPredicted RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 ARPC2O15144 300 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 NDUFA7O95182 113 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 SOX14O95416 240 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 PTBP3O95758 552 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 GASTP01350 101 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 TFF1P04155 84 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 ANXA2P07355 339 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 SELLP14151 372 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 OTX1P32242 354 aaPredicted RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 BPIFB3P59826 476 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 IKZF1Q13422 519 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 CRMP1Q14194 572 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 PDCD1Q15116 288 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 PCK2Q16822 640 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 GFOD2Q3B7J2 385 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 HSP90B2PQ58FF3 399 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 HIST2H2BDQ6DRA6 164 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 ASPHD2Q6ICH7 369 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLC16A9Q7RTY1 509 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 VMO1Q7Z5L0 202 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZDHHC21Q8IVQ6 265 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 C11orf53Q8IXP5 236 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 PNKDQ8N490 385 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 TMEM86BQ8N661 226 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM216BQ8N7L0 139 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR6K6Q8NGW6 343 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR8S1Q8NH09 359 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 LINC01006Q8NI28 216 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 CDRT15Q96T59 188 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 KCNJ15Q99712 375 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 PKP2Q99959 881 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 CITED1Q99966 193 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 BTBD10Q9BSF8 475 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 CNTD2Q9H8S5 307 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 SIRT7Q9NRC8 400 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 SNTG1Q9NSN8 517 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 TBC1D23Q9NUY8 699 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 C14orf119Q9NWQ9 140 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 DNAJC27Q9NZQ0 273 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 MAGEL2Q9UJ55 1249 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 KCNG2Q9UJ96 466 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 RPUSD1Q9UJJ7 312 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 NOP16Q9Y3C1 178 aaKnown RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 POMT1Q9Y6A1 747 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 CDH10Q9Y6N8 788 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 TNFRSF11BO00300 401 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 NDUFA2O43678 99 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TSPAN15O95858 294 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 LHBP01229 141 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 FMO3P31513 532 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 IER3P46695 156 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 CX3CR1P49238 355 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 ENTPD1P49961 510 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM3AP98173 230 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 KLRD1Q13241 179 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 EIF2B1Q14232 305 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TIGD6Q17RP2 521 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 MICBQ29980 383 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 CDONQ4KMG0 1287 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 WDR38Q5JTN6 314 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 WDR82Q6UXN9 313 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 CYP2R1Q6VVX0 501 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM57BQ71RH2 274 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 DPY19L4Q7Z388 723 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 LINC00471Q8N535 108 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 SPERTQ8NA61 448 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR1M1Q8NGA1 313 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR4C15Q8NGM1 316 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR4Q3Q8NH05 313 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM110DQ8TAY7 271 aaPredicted RBP7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 DYRK2Q92630 601 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 UBE2FQ969M7 185 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 OTULINQ96BN8 352 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 SGK3Q96BR1 496 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 REEP6Q96HR9 211 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 RBM4BQ9BQ04 359 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 PAPOLGQ9BWT3 736 aaKnown RBP7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TSSK6Q9BXA6 273 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 MED20Q9H944 212 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TCF7L1Q9HCS4 588 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 IL1RAPQ9NPH3 570 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TRIM36Q9NQ86 728 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 ARMC1Q9NVT9 282 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 TAS2R1Q9NYW7 299 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 CD300AQ9UGN4 299 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM96BQ9Y3D0 163 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 RHBDD3Q9Y3P4 386 aa7.09□□□□□ -1.27
CTDNEP1-203ENST00000570385 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 DHRS12A0PJE2 317 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 FAM183AA6NL82 134 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF878C9JN71 531 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ACOT8O14734 319 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 CDIPTO14735 213 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 TIMM23O14925 209 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 XRCC2O43543 280 aa7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 ECDO95905 644 aaPredicted RBP7.08□□□□□ -1.28
CTDNEP1-203ENST00000570385 HSD17B1P14061 328 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms