RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 FAM3AP98173 230 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 NCMAPQ5T1S8 102 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 SLC22A25Q6T423 547 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 SEMA6DQ8NFY4 1073 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 NDNFQ8TB73 568 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 SSC4DQ8WTU2 575 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 CRIM1Q9NZV1 1036 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 PIGLQ9Y2B2 252 aa13.27□□□□□ -0.29
HERPUD1-219ENST00000570273 RTTNQ86VV8 2226 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 ANKHD1Q8IWZ3 2542 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 A6NIN4 97 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 PIN1P1O15428 100 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 RAF1P04049 648 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 CD3EP07766 207 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 FAHP16930 419 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 TUBG1P23258 451 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 ACKR3P25106 362 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 MAP2K3P46734 347 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 RIPPLY1Q0D2K3 151 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 SPCS2Q15005 226 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 OR8B8Q15620 311 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 RGS7BPQ6MZT1 257 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 ADAM5Q6NVV9 412 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 FBXW12Q6X9E4 464 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 Q6ZSR3 168 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 USP43Q70EL4 1123 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 OR56B2PQ8NGI1 322 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 ADAT3Q96EY9 351 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 PPIL3Q9H2H8 161 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 TUBG2Q9NRH3 451 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 TAS2R4Q9NYW5 299 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 CKLFQ9UBR5 152 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 POU2F3Q9UKI9 436 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
HERPUD1-219ENST00000570273 LRRK2Q5S007 2527 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 FSTP19883 344 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 GCH1P30793 250 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 THBS4P35443 961 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 MPV17P39210 176 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 NKX6-1P78426 367 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 ZNF718Q3SXZ3 478 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 VHLLQ6RSH7 139 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 MARS2Q96GW9 593 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 SLITRK2Q9H156 845 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 DCSTAMPQ9H295 470 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 TCF7L1Q9HCS4 588 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 KLF2Q9Y5W3 355 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-219ENST00000570273 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 ANKRD61A6NGH8 418 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 CD300LBA8K4G0 201 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 CDRT1O95170 752 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 RAC2P15153 192 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 SELEP16581 610 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 IGFBP2P18065 325 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 SDC2P34741 201 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 GLRXP35754 106 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 MTNR1BP49286 362 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 PPP3R1P63098 170 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 TNK1Q13470 666 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 OR2T2Q6IF00 324 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 MEX3BQ6ZN04 569 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 DMRTC2Q8IXT2 367 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 CSNK2A3Q8NEV1 391 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 NUP37Q8NFH4 326 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 OR13C9Q8NGT0 318 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 KLF14Q8TD94 323 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 FAM222BQ8WU58 562 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 C10orf35Q96D05 121 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 PIK3IP1Q96FE7 263 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 RNF115Q9Y4L5 304 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 HCFC1P51610 2035 aa13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 SPTBN1Q01082 2364 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-219ENST00000570273 TRAV8-7A0A075B6U6 113 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 TRAV1-2A0A0B4J238 106 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 ZNF816-ZNF321PA0A0X1KG74 233 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 A0A1W2PPW3 197 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 SHISA3A0PJX4 238 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 DEFB108AA8MXU0 73 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 PRSS44E7EML9 344 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 SIAH2O43255 324 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 FABP6P51161 128 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 MXD1Q05195 221 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 ZBTB37Q5TC79 503 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 MBNL2Q5VZF2 373 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 SERPINA12Q8IW75 414 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 OR5AS1Q8N127 324 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 PP6455Q8WZ26 134 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 ITFG2Q969R8 447 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 PAPOLGQ9BWT3 736 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 CHST5Q9GZS9 411 aa13.23□□□□□ -0.29
HERPUD1-219ENST00000570273 ZCCHC4Q9H5U6 513 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms