RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	S100A13	Q99584	98 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ARPC5L	Q9BPX5	153 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF471	Q9BX82	626 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	NMES1	Q9C002	83 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	OR10A2	Q9H208	303 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	NELFA	Q9H3P2	528 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	SPAG17	Q6Q759	2223 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883		A0A0U1RQV5	110 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	C5orf51	A6NDU8	294 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	OR2AT4	A6NND4	320 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	CEACAM18	A8MTB9	384 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	CCS	O14618	274 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	MTRF1	O75570	445 aa	Known RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	LIPC	P11150	499 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	PRF1	P14222	555 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	FPR2	P25090	351 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	PSMB6	P28072	239 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ALDH3B1	P43353	468 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	OR3A4P	P47883	348 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ATP1B3	P54709	279 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ARFRP1	Q13795	201 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	SGCA	Q16586	387 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	LRRC37A5P	Q49AS3	106 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	KCTD9	Q7L273	389 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	TMEM185A	Q8NFB2	350 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	OR10K1	Q8NGX5	313 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	OR14K1	Q8NGZ2	314 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	MRGPRF	Q96AM1	343 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	CPNE2	Q96FN4	548 aa	Predicted RBP	11.19	□□□□□ -0.62
PKM-222	ENST00000568883	SEC22A	Q96IW7	307 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	SHARPIN	Q9H0F6	387 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	GAREM1	Q9H706	876 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF160	Q9HCG1	818 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	PRDM6	Q9NQX0	595 aa		11.19	□□□□□ -0.62
PKM-222	ENST00000568883	TP53BP1	Q12888	1972 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	CUL9	Q8IWT3	2517 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	BRWD1	Q9NSI6	2320 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	CCDC163	A0A0D9SF12	145 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	LY6G6E	A0A0G2JKS1	128 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	GJE1	A6NN92	205 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883		C9J4A7	227 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	NPIPA2	E9PIF3	369 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	NPIPA3	F8WFD2	350 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	OPN1LW	P04000	364 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	GP1BA	P07359	652 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	SLC2A1	P11166	492 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	ECI1	P42126	302 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	OR3A2	P47893	321 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	LUM	P51884	338 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF133	P52736	654 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	DSCR4	P56555	118 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	MFAP5	Q13361	173 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	PCOLCE	Q15113	449 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	TUSC1	Q2TAM9	212 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	FOXL2NB	Q6ZUU3	175 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	MOB3C	Q70IA8	216 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	GLRX5	Q86SX6	157 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	MARCH1	Q8TCQ1	289 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	HLA-C	Q95604	372 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	TMEM54	Q969K7	222 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	C1orf147	Q96MC9	270 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	NICN1	Q9BSH3	213 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.18	□□□□□ -0.62
PKM-222	ENST00000568883	RAB18	Q9NP72	206 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883		U3KQA8	63 aa		11.18	□□□□□ -0.62
PKM-222	ENST00000568883	RNF222	A6NCQ9	220 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	DBX1	A6NMT0	343 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SERPINE3	A8MV23	424 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883		F5H0A9	414 aa	Predicted RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	MFNG	O00587	321 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	CA11	O75493	328 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	DHRS3	O75911	302 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	CRH	P06850	196 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PET100	P0DJ07	73 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF17	P17021	662 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	AMY2B	P19961	511 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ZNF84	P51523	738 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	3e-8	■□□□□ 8
PKM-222	ENST00000568883	SNTB1	Q13884	538 aa	Known RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SURF2	Q15527	256 aa	Predicted RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	MICB	Q29980	383 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	GFOD2	Q3B7J2	385 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SLC22A6	Q4U2R8	563 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PAN3	Q58A45	887 aa	Known RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	PRAMEF20	Q5VT98	475 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	NSUN5P2	Q63ZY6	315 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	STPG2	Q8N412	459 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	FAM89B	Q8N5H3	189 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	ADAD2	Q8NCV1	583 aa	Known RBP	11.17	□□□□□ -0.62
PKM-222	ENST00000568883	TMEM104	Q8NE00	496 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	OR51T1	Q8NGJ9	327 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	M1AP	Q8TC57	530 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SSC4D	Q8WTU2	575 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	SPTSSA	Q969W0	71 aa		11.17	□□□□□ -0.62
PKM-222	ENST00000568883	NECAB3	Q96P71	396 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms