RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 THBS4P35443 961 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 DDOSTP39656 456 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 MAP2K3P46734 347 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 LSAMPQ13449 338 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 HLXQ14774 488 aaPredicted RBP26.38■■□□□ 1.81
CTCF-203ENST00000566078 CROCCP3Q8IVE0 287 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 OR51A2Q8NGJ7 313 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 OR13C9Q8NGT0 318 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 AP3S1Q92572 193 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 MMP27Q9H306 513 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 A3GALT2U3KPV4 340 aa26.38■■□□□ 1.81
CTCF-203ENST00000566078 TNK1Q13470 666 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 CDSNQ15517 529 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 OR8B8Q15620 311 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 IDNKQ5T6J7 187 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 SEZ6L2Q6UXD5 910 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 PGAP1Q75T13 922 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 OR1M1Q8NGA1 313 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 TBC1D15Q8TC07 691 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 RNASE6Q93091 150 aaKnown RBP26.37■■□□□ 1.81
CTCF-203ENST00000566078 C10orf35Q96D05 121 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 ZC3HAV1LQ96H79 300 aaKnown RBP26.37■■□□□ 1.81
CTCF-203ENST00000566078 REPIN1Q9BWE0 567 aaKnown RBP26.37■■□□□ 1.81
CTCF-203ENST00000566078 ZCCHC4Q9H5U6 513 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 V9GY05 133 aa26.37■■□□□ 1.81
CTCF-203ENST00000566078 CALCRP30988 508 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 NAAAQ02083 359 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 SPOCK1Q08629 439 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 RIPPLY1Q0D2K3 151 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 OPA3Q9H6K4 179 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 SMURF1Q9HCE7 757 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 DAPK2Q9UIK4 370 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 RAB3AP20336 220 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 UCP2P55851 309 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 PPP1CBP62140 327 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 SPATA46Q5T0L3 261 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 WFDC8Q8IUA0 241 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 ZNF843Q8N446 348 aa26.36■■□□□ 1.81
CTCF-203ENST00000566078 A0A075B6Q4 140 aa26.35■■□□□ 1.81
CTCF-203ENST00000566078 SLC2A2P11168 524 aaPredicted RBP26.35■■□□□ 1.81
CTCF-203ENST00000566078 PPP3CBP16298 524 aa26.35■■□□□ 1.81
CTCF-203ENST00000566078 ZNF529Q6P280 563 aa26.35■■□□□ 1.81
CTCF-203ENST00000566078 PP6455Q8WZ26 134 aa26.35■■□□□ 1.81
CTCF-203ENST00000566078 LRRC46Q96FV0 321 aa26.35■■□□□ 1.81
CTCF-203ENST00000566078 THBDP07204 575 aa26.34■■□□□ 1.81
CTCF-203ENST00000566078 SSX8Q7RTT4 187 aa26.34■■□□□ 1.81
CTCF-203ENST00000566078 OR1J1Q8NGS3 322 aa26.34■■□□□ 1.81
CTCF-203ENST00000566078 CHST5Q9GZS9 411 aa26.34■■□□□ 1.81
CTCF-203ENST00000566078 KCNJ16Q9NPI9 418 aa26.34■■□□□ 1.81
CTCF-203ENST00000566078 KMT2BQ9UMN6 2715 aaPredicted RBP26.34■■□□□ 1.81
CTCF-203ENST00000566078 GGT3PA6NGU5 568 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 SULT1B1O43704 296 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 ATF1P18846 271 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 BDKRB2P30411 391 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 PSMD7P51665 324 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 BMXP51813 675 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 ERVS71-1P61550 626 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 HES5Q5TA89 166 aa26.33■■□□□ 1.81
CTCF-203ENST00000566078 UNQ6126/PRO20091Q6UXV3 157 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 NKAIN3Q8N8D7 197 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 OR56B2PQ8NGI1 322 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 OR6Q1Q8NGQ2 317 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 OR2J1Q9GZK6 312 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 MEGF11A6BM72 1044 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 IFITM5A6NNB3 132 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 AIPO00170 330 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 C1QL1O75973 258 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 THBS2P35442 1172 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 RAD52P43351 418 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 UTS2BQ765I0 119 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 SLC25A40Q8TBP6 338 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 WFIKKN1Q96NZ8 548 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 TMEM138Q9NPI0 162 aa26.32■■□□□ 1.8
CTCF-203ENST00000566078 CRYAAP02489 173 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 GRNP28799 593 aaKnown RBP26.31■■□□□ 1.8
CTCF-203ENST00000566078 DDI2Q5TDH0 399 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 GLT8D1Q68CQ7 371 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 OR5AS1Q8N127 324 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 KCTD12Q96CX2 325 aaKnown RBP26.31■■□□□ 1.8
CTCF-203ENST00000566078 BCL2L14Q9BZR8 327 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 PLGRKTQ9HBL7 147 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 GPR173Q9NS66 373 aa26.31■■□□□ 1.8
CTCF-203ENST00000566078 ZNF816-ZNF321PA0A0X1KG74 233 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 CTDSP2O14595 271 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 ZG16O60844 167 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 ERCC1P07992 297 aaPredicted RBP26.3■■□□□ 1.8
CTCF-203ENST00000566078 ZBTB37Q5TC79 503 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 FBXW12Q6X9E4 464 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 ACOT12Q8WYK0 555 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 NKX3-1Q99801 234 aaPredicted RBP26.3■■□□□ 1.8
CTCF-203ENST00000566078 COMMD3Q9UBI1 195 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 CGGBP1Q9UFW8 167 aaPredicted RBP26.3■■□□□ 1.8
CTCF-203ENST00000566078 PEX16Q9Y5Y5 336 aa26.3■■□□□ 1.8
CTCF-203ENST00000566078 CADP27708 2225 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 RGS5O15539 181 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 OCMP0CE72 109 aaPredicted RBP26.29■■□□□ 1.8
CTCF-203ENST00000566078 UBE2V2Q15819 145 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 CLVS2Q5SYC1 327 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 JAGN1Q8N5M9 183 aa26.29■■□□□ 1.8
CTCF-203ENST00000566078 OR52N4Q8NGI2 321 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms