RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DCTDP32321 178 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 GDI2P50395 445 aaKnown RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 HGFACQ04756 655 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 EGR3Q06889 387 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 CDK10Q15131 360 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 TBC1D28Q2M2D7 210 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 KCTD18Q6PI47 426 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PAQR4Q8N4S7 273 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PIK3IP1Q96FE7 263 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 OR8B4Q96RC9 309 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 C7orf50Q9BRJ6 194 aaKnown RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 MARVELD1Q9BSK0 173 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 GON7Q9BXV9 100 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 C11orf54Q9H0W9 315 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PTTG3PQ9NZH4 202 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 LAMP5Q9UJQ1 280 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 KLHDC2Q9Y2U9 406 aa10.9□□□□□ -0.66
SF3B3-206ENST00000565990 PTPN13Q12923 2485 aa10.9□□□□□ -0.67
SF3B3-206ENST00000565990 IGHV2OR16-5A0A0B4J2B6 119 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 C5orf49A4QMS7 147 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 PRR32B1ATL7 298 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF878C9JN71 531 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 ABCD4O14678 606 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 ORC5O43913 435 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 CCL2P13500 99 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 APLNRP35414 380 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 TALDO1P37837 337 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 NR4A2P43354 598 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 UCP2P55851 309 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 GRB2P62993 217 aaKnown RBP10.89□□□□□ -0.67
SF3B3-206ENST00000565990 NKX6-1P78426 367 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-206ENST00000565990 IFITM2Q01629 132 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF85Q03923 595 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 MXD1Q05195 221 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 CNIH2Q6PI25 160 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 PRSS45Q7RTY3 260 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 C1orf174Q8IYL3 243 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 ZNF679Q8IYX0 411 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 SYS1Q8N2H4 156 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 Q8N402 240 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 NUP37Q8NFH4 326 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 THEM6Q8WUY1 208 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 SPRYD4Q8WW59 207 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-206ENST00000565990 MRI1Q9BV20 369 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 TPK1Q9H3S4 243 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 CYSLTR2Q9NS75 346 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 CENPEQ02224 2701 aa10.89□□□□□ -0.67
SF3B3-206ENST00000565990 TRAV1-2A0A0B4J238 106 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 A0A1W2PPR1 153 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 PLA2G10O15496 165 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 LYRM1O43325 122 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 TPPPO94811 219 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 APOL3O95236 402 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 DBHP09172 617 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 ACSM4P0C7M7 580 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 CLEC2LP0C7M8 214 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 FAM157BP0CG42 384 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 CELP19835 753 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 TUBG1P23258 451 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 WNT5AP41221 380 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 HTR5AP47898 357 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 RAG2P55895 527 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 DRAM2Q6UX65 266 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 SSX6Q7RTT6 188 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 KCTD20Q7Z5Y7 419 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 NAA40Q86UY6 237 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 RFLNBQ8N5W9 214 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 ASCC1Q8N9N2 400 aaKnown RBP10.88□□□□□ -0.67
SF3B3-206ENST00000565990 OR10H4Q8NGA5 316 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 SPTSSAQ969W0 71 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 CREB3L1Q96BA8 519 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 C4orf45Q96LM5 186 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 NEDD4LQ96PU5 975 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 ALG8Q9BVK2 526 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 C1QTNF5Q9BXJ0 243 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 TUBG2Q9NRH3 451 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 CENPMQ9NSP4 180 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 SLCO1C1Q9NYB5 712 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 ABRACLQ9P1F3 81 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 RNF115Q9Y4L5 304 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 SPEF1Q9Y4P9 236 aa10.88□□□□□ -0.67
SF3B3-206ENST00000565990 TACC2O95359 2948 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 FAM240BA0A1B0GVZ2 78 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 ATP6V1G2-DDX39BF2Z307 99 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 J3QW42 95 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 SC5DO75845 299 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 GATBO75879 557 aaKnown RBP10.87□□□□□ -0.67
SF3B3-206ENST00000565990 PLAUP00749 431 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 NGFP01138 241 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 APOC1P02654 83 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 SSTR2P30874 369 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 GLRXP35754 106 aa10.87□□□□□ -0.67
SF3B3-206ENST00000565990 RAD52P43351 418 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms