RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FBXL17Q9UF56 701 aa18.2■□□□□ 0.5
MAP1LC3B-206ENST00000564844 VDAC3Q9Y277 283 aa18.2■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TRAV36DV7A0A075B6V5 113 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TSPAN15O95858 294 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CSTBP04080 98 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ACKR3P25106 362 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CX3CR1P49238 355 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 POU3F1Q03052 451 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FDX2Q6P4F2 183 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF704Q6ZNC4 412 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF440Q8IYI8 595 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 EHFQ9NZC4 300 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 WIF1Q9Y5W5 379 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TMED7-TICAM2A0A0A6YYA0 188 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HCKP08631 526 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FCGR3AP08637 254 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GP1BBP13224 206 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CTSEP14091 401 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CSNK2A1P68400 391 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CYCSP99999 105 aaKnown RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ROM1Q03395 351 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HGFACQ04756 655 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FUT7Q11130 342 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SP6Q3SY56 376 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CSNK2A3Q8NEV1 391 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SCARF2Q96GP6 870 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 DUSP15Q9H1R2 295 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF701Q9NV72 531 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 POLR1DQ9Y2S0 133 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 XRCC2O43543 280 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FCGR2CP31995 323 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C1orf100Q5SVJ3 147 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 OR5H2Q8NGV7 314 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PTPMT1Q8WUK0 201 aaPredicted RBP18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 S1PR5Q9H228 398 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TXNIPQ9H3M7 391 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GPR132Q9UNW8 380 aa18.19■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SFT2D2O95562 160 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TTRP02766 147 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PRH1P02810 166 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CDAP32320 146 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PRTGQ2VWP7 1150 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CARD17Q5XLA6 110 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ABHD12BQ7Z5M8 362 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RTBDNQ9BSG5 229 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 VSX1Q9NZR4 365 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 MMP24Q9Y5R2 645 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PUS1Q9Y606 427 aaKnown RBP eCLIP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLC33A1O00400 549 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CLPSP04118 112 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RPL12P30050 165 aaKnown RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 KIR2DL1P43626 348 aaPredicted RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TMEM50BP56557 158 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SPEM2Q0P670 501 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C1orf140Q5VVS0 124 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SKA3Q8IX90 412 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C19orf47Q8N9M1 422 aaKnown RBP18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 APCDD1LQ8NCL9 501 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 OR13G1Q8NGZ3 307 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF519Q8TB69 540 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ERGIC1Q969X5 290 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SMIM8Q96KF7 97 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 MESP1Q9BRJ9 268 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 URGCP-MRPS24S4R325 110 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SHANK1Q9Y566 2161 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PCDH15Q96QU1 1955 aa18.18■□□□□ 0.5
MAP1LC3B-206ENST00000564844 MUC22E2RYF6 1773 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 A0A0A6YYH2 397 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 A6NJ64 397 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ATXN7O15265 892 aaPredicted RBP18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 DIRAS3O95661 229 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 GNRH1P01148 92 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 OR8U8P0C7N1 319 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SMIM6P0DI80 62 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 P2RY4P51582 365 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TMEM33P57088 247 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 NAAAQ02083 359 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLC22A24Q8N4F4 322 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 LIPHQ8WWY8 451 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RLN3Q8WXF3 142 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 REEP6Q96HR9 211 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 MRPS28Q9Y2Q9 187 aaKnown RBP18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLC37A1P57057 533 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HSD17B11Q8NBQ5 300 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 C5orf34Q96MH7 638 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 LPAR5Q9H1C0 372 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SLC26A1Q9H2B4 701 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PRODH2Q9UF12 536 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 K7EPK0 472 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HEXAP06865 529 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 HKR1P10072 659 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ZNF20P17024 532 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 PRSS12P56730 875 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 TMEM244Q5VVB8 128 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 FAM71E2Q8N5Q1 922 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 CDC6Q99741 560 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 SPOCK3Q9BQ16 436 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 ADAM19Q9H013 955 aa18.17■□□□□ 0.5
MAP1LC3B-206ENST00000564844 RHBDD3Q9Y3P4 386 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms