RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-210	ENST00000564582	PRSS21	Q9Y6M0	314 aa		4.95	□□□□□ -1.62
CHD9-210	ENST00000564582	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.95	□□□□□ -1.62
CHD9-210	ENST00000564582	MYLK	Q15746	1914 aa		4.95	□□□□□ -1.62
CHD9-210	ENST00000564582	XIRP1	Q702N8	1843 aa	Known RBP	4.95	□□□□□ -1.62
CHD9-210	ENST00000564582	MYO16	Q9Y6X6	1858 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	EVPL	Q92817	2033 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TDRD15	B5MCY1	1934 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RLF	Q13129	1914 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TRBV24-1	A0A075B6N3	115 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TRAV18	A0A075B6X5	111 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TRBV5-7	A0A0A0MS05	114 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM272	A0A1B0GTI8	110 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC5A10	A0PJK1	596 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TSPAN11	A1L157	253 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	C17orf102	A2RUQ5	167 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TLCD2	A6NGC4	264 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR6C76	A6NM76	312 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SOCS6	O14544	535 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TOX3	O15405	576 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	DLEU1	O43261	78 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	NDUFB2	O95178	105 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	HSPB1	P04792	205 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	HEXB	P07686	556 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	DANCR	P0C864	163 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RNF224	P0DH78	156 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SMIM10L2A	P0DMW4	78 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SMIM10L2B	P0DMW5	78 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	COX5B	P10606	129 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	PTHLH	P12272	177 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	NPPB	P16860	134 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CD22	P20273	847 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	BCKDHB	P21953	392 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	DUSP1	P28562	367 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	IMPA1	P29218	277 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	GALNS	P34059	522 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	KIR3DL2	P43630	455 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SPINT3	P49223	89 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	NDUFA6	P56556	154 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CLDN12	P56749	244 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RPS20	P60866	119 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RPS11	P62280	158 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	MC1R	Q01726	317 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SPOCK1	Q08629	439 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	EIF3I	Q13347	325 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF266	Q14584	549 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR8G1	Q15617	311 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RAB30	Q15771	203 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CDKN3	Q16667	212 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	DEFB115	Q30KQ5	88 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	AMZ1	Q400G9	498 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	DCAF12L2	Q5VW00	463 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM268	Q5VZI3	342 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	MFSD14C	Q5VZR4	134 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	GGNBP1	Q5YKI7	109 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC18B1	Q6NT16	456 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FBXW12	Q6X9E4	464 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FRRS1	Q6ZNA5	592 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC16A9	Q7RTY1	509 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TIPARP	Q7Z3E1	657 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMED4	Q7Z7H5	227 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FJX1	Q86VR8	437 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	C17orf64	Q86WR6	236 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TGIF2LY	Q8IUE0	185 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TGIF2LX	Q8IUE1	241 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM183A	Q8IXX5	376 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM24B	Q8N5W8	94 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM99	Q8N816	258 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	EXD3	Q8N9H8	876 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	AVL9	Q8NBF6	648 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR6J1	Q8NGC5	347 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR4D9	Q8NGE8	314 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR52N4	Q8NGI2	321 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR52E1	Q8NGJ3	308 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR5AK3P	Q8NH89	298 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TMED6	Q8WW62	240 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	HPSE2	Q8WWQ2	592 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CDS1	Q92903	461 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM3D	Q96BQ1	224 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	BPIFA2	Q96DR5	249 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	MS4A6E	Q96DS6	147 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TVP23C	Q96ET8	276 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	AKR1E2	Q96JD6	320 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ADGRG7	Q96K78	797 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	PACRG	Q96M98	296 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF75A	Q96N20	296 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	OR2M4	Q96R27	311 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	IMMP2L	Q96T52	175 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	GPA33	Q99795	319 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	NIPSNAP3B	Q9BS92	247 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	PCGF1	Q9BSM1	259 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	NAA11	Q9BSU3	229 aa	Predicted RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	TRMT61B	Q9BVS5	477 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	RAB11FIP5	Q9BXF6	653 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	EIF5A2	Q9GZV4	153 aa	Known RBP	4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	CST11	Q9H112	138 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	ARV1	Q9H2C2	271 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FKRP	Q9H9S5	495 aa		4.94	□□□□□ -1.62
CHD9-210	ENST00000564582	FN3KRP	Q9HA64	309 aa		4.94	□□□□□ -1.62

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