RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LRP4O75096 1905 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 RAMP1O60894 148 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 APLNRP35414 380 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 RPP30P78346 268 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 GPR137CQ8N3F9 429 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 ZDHHC22Q8N966 263 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 SNHG12Q9BXW3 62 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 SERTAD3Q9UJW9 196 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF346Q9UL40 294 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 HS3ST3B1Q9Y662 390 aa12.52□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A087WZY1 265 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ELOA3DA6NLF2 546 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 UPK3AO75631 287 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ELOA3BQ3SY89 546 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 FOXRED2Q8IWF2 684 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 LRRC18Q8N456 261 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ELOA3Q8NG57 546 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 M1APQ8TC57 530 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 NT5CQ8TCD5 201 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 SERINC2Q96SA4 455 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 HIST1H2BLQ99880 126 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC35B3Q9H1N7 401 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 PDE7BQ9NP56 450 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 PRR13Q9NZ81 148 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 UNC13CQ8NB66 2214 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A087WUJ7 227 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 C9J4A7 227 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TOX3O15405 576 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TNFSF14O43557 240 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNF354AO60765 605 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TACSTD2P09758 323 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ARRB1P49407 418 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 RAB32Q13637 225 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 ZNHIT3Q15649 155 aaPredicted RBP12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 MFSD12Q6NUT3 480 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 PLPP7Q8NBV4 271 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 OR9A4Q8NGU2 314 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 FAM174AQ8TBP5 190 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 GNRHR2Q96P88 292 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 CCDC3Q9BQI4 270 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 C19orf12Q9NSK7 152 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 KLHDC2Q9Y2U9 406 aa12.51□□□□□ -0.41
GTF3C1-203ENST00000562609 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CYB5BO43169 146 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CST4P01036 141 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 NPSP0C0P6 89 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CPMP14384 443 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TLX1P31314 330 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 S100A10P60903 97 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC10A1Q14973 349 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 ELOBQ15370 118 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CEBPEQ15744 281 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 EIPR1Q53HC9 387 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 MRPL2Q5T653 305 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 R3HDM4Q96D70 268 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 KLHDC7BQ96G42 594 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 FAHD2AQ96GK7 314 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 LRFN5Q96NI6 719 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 INTS14Q96SY0 518 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 G6PC3Q9BUM1 346 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 MRM2Q9UI43 246 aaKnown RBP12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TGIF2-C20orf24A0A0A6YYL0 155 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC17A2O00624 439 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TAAR5O14804 337 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CT62P0C5K7 136 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TRGC1P0CF51 173 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 GZMBP10144 247 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 FHL1Q13642 323 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC22A6Q4U2R8 563 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 DGAT2L6Q6ZPD8 337 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 CNTNAP3Q9BZ76 1288 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 SLC17A5Q9NRA2 495 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
GTF3C1-203ENST00000562609 A0A1B0GV50 99 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 LYL1P12980 280 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 BPIFB3P59826 476 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 OR13C9Q8NGT0 318 aa12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-203ENST00000562609 ADAD1Q96M93 576 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms