RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CLDN25C9JDP6 229 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 F5H5P2 479 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 PPIHO43447 177 aaKnown RBP14.14□□□□□ -0.15
CLK3-207ENST00000562389 FADS2O95864 444 aaKnown RBP14.14□□□□□ -0.15
CLK3-207ENST00000562389 CA6P23280 308 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 CD200P41217 278 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 SLC3A1Q07837 685 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 RIPK1Q13546 671 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 OR8G1Q15617 311 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 CDONQ4KMG0 1287 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 LIPNQ5VXI9 398 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 ZNF771Q7L3S4 317 aaPredicted RBP14.14□□□□□ -0.15
CLK3-207ENST00000562389 FAM220AQ7Z4H9 259 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 C8orf59Q8N0T1 100 aaPredicted RBP14.14□□□□□ -0.15
CLK3-207ENST00000562389 CNIH3Q8TBE1 160 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 CCL17Q92583 94 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 SIGLEC11Q96RL6 698 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 GSX1Q9H4S2 264 aaPredicted RBP14.14□□□□□ -0.15
CLK3-207ENST00000562389 OR52A1Q9UKL2 312 aa14.14□□□□□ -0.15
CLK3-207ENST00000562389 RPP14O95059 124 aaKnown RBP14.13□□□□□ -0.15
CLK3-207ENST00000562389 IGHA1P01876 353 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 TTRP02766 147 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 ACKR3P25106 362 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 GATA4P43694 442 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 CHN2P52757 468 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 KRTAP1-1Q07627 177 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 MAB21L1Q13394 359 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 SMN1Q16637 294 aaKnown RBP14.13□□□□□ -0.15
CLK3-207ENST00000562389 TMEM249Q2WGJ8 235 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 KLHL22Q53GT1 634 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 BCL2L15Q5TBC7 163 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 CLEC9AQ6UXN8 241 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 KCTD20Q7Z5Y7 419 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 CATSPERDQ86XM0 798 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 ELMOD2Q8IZ81 293 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 FTMTQ8N4E7 242 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 SPERTQ8NA61 448 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 TFAP2CQ92754 450 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 MRPL48Q96GC5 212 aaKnown RBP14.13□□□□□ -0.15
CLK3-207ENST00000562389 MYCBPQ99417 103 aaPredicted RBP14.13□□□□□ -0.15
CLK3-207ENST00000562389 SOX7Q9BT81 388 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 VCX3BQ9H321 246 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 GCM1Q9NP62 436 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 INPP5EQ9NRR6 644 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 TREM2Q9NZC2 230 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 GNG8Q9UK08 70 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 GTF2A1LQ9UNN4 478 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 PPP1R3CQ9UQK1 317 aa14.13□□□□□ -0.15
CLK3-207ENST00000562389 IFNL4K9M1U5 179 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 FAM20BO75063 409 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ATP6V1G2O95670 118 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 PTBP3O95758 552 aaKnown RBP14.12□□□□□ -0.15
CLK3-207ENST00000562389 LY6G6DO95868 133 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 HEXAP06865 529 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 GNAO1P09471 354 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ATP6V1B1P15313 513 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 AQP4P55087 323 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ACTA2P62736 377 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ACTG2P63267 376 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 MZT1Q08AG7 82 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 GALEQ14376 348 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 TP53I3Q53FA7 332 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 KRT74Q7RTS7 529 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 EGFL6Q8IUX8 553 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 OR52I1Q8NGK6 324 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 OR51E1Q8TCB6 317 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 FBLIM1Q8WUP2 373 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 RORBQ92753 470 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ERGIC1Q969X5 290 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 PPP1R14AQ96A00 147 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 TIMD4Q96H15 378 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 JAM3Q9BX67 310 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 GPR84Q9NQS5 396 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 ACOXLQ9NUZ1 547 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 MYRFQ9Y2G1 1151 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 WIPI2Q9Y4P8 454 aa14.12□□□□□ -0.15
CLK3-207ENST00000562389 MAP1AP78559 2803 aaPredicted RBP14.12□□□□□ -0.15
CLK3-207ENST00000562389 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.11□□□□□ -0.15
CLK3-207ENST00000562389 IRGMA1A4Y4 181 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 CST4P01036 141 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 MAP2K3P46734 347 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 ZNF181Q2M3W8 571 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 COMMD2Q86X83 199 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 PLPP7Q8NBV4 271 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 HPS1Q92902 700 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 RAB1CQ92928 201 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 DVL3Q92997 716 aaPredicted RBP14.11□□□□□ -0.15
CLK3-207ENST00000562389 ZNF649Q9BS31 505 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 ALG8Q9BVK2 526 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 PAPOLGQ9BWT3 736 aaKnown RBP14.11□□□□□ -0.15
CLK3-207ENST00000562389 ABCB9Q9NP78 766 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 FGF20Q9NP95 211 aaPredicted RBP14.11□□□□□ -0.15
CLK3-207ENST00000562389 ERVK13-1Q9NX77 482 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 DCAF16Q9NXF7 216 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 RHBDD3Q9Y3P4 386 aa14.11□□□□□ -0.15
CLK3-207ENST00000562389 ZNF816-ZNF321PA0A0X1KG74 233 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 LRP5LA4QPB2 252 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 CD5LO43866 347 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 MTRF1O75570 445 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms