RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CD163L1Q9NR16 1453 aa3.85□□□□□ -1.79
SMG1-204ENST00000561940 QRICH2Q9H0J4 1663 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 C4BP0C0L5 1744 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 ZBTB5O15062 677 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 NVLO15381 856 aaKnown RBP3.84□□□□□ -1.79
SMG1-204ENST00000561940 GZMAP12544 262 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 PGAM1P18669 254 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 RAB4AP20338 218 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 WARSP23381 471 aaKnown RBP3.84□□□□□ -1.79
SMG1-204ENST00000561940 MAGEA1P43355 309 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 OR1G1P47890 313 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 SERPINB8P50452 374 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 RAD51Q06609 339 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 EBI3Q14213 229 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 SNRNP35Q16560 246 aaKnown RBP3.84□□□□□ -1.79
SMG1-204ENST00000561940 TTC19Q6DKK2 380 aaPredicted RBP3.84□□□□□ -1.79
SMG1-204ENST00000561940 FAM122BQ7Z309 247 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 FAM71AQ8IYT1 594 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 PGAM4Q8N0Y7 254 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 SYNDIG1Q9H7V2 258 aa3.84□□□□□ -1.79
SMG1-204ENST00000561940 UBE2ZQ9H832 354 aaPredicted RBP3.84□□□□□ -1.79
SMG1-204ENST00000561940 CEP290O15078 2479 aa3.84□□□□□ -1.8
SMG1-204ENST00000561940 ITSN1Q15811 1721 aa3.84□□□□□ -1.8
SMG1-204ENST00000561940 PPLO60437 1756 aa3.84□□□□□ -1.8
SMG1-204ENST00000561940 BRCA1P38398 1863 aaKnown RBP3.84□□□□□ -1.8
SMG1-204ENST00000561940 ANKRD12Q6UB98 2062 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 KIAA0100Q14667 2235 aaKnown RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 A0A1W2PP18 115 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 TSPAN11A1L157 253 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 KRT16P08779 473 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 IGHV1-8P0DP01 117 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 ERGP11308 486 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 CCT6AP40227 531 aaKnown RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 MNAT1P51948 309 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 UBE2NP61088 152 aaKnown RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 RAB11AP62491 216 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 SPAG1Q07617 926 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 SYCNQ0VAF6 134 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 QPRTQ15274 297 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 RAB11BQ15907 218 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 TFDP3Q5H9I0 405 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 STUMQ69YW2 141 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 ABHD12BQ7Z5M8 362 aaPredicted RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 RIMKLAQ8IXN7 391 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 PRSS58Q8IYP2 241 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 SNX31Q8N9S9 440 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 OR51F2Q8NH61 342 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 CA5BP1Q8WTZ4 195 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 ISG20Q96AZ6 181 aaKnown RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 NEURL3Q96EH8 262 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 NRBF2Q96F24 287 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 RNF145Q96MT1 663 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 UQCC2Q9BRT2 126 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 FAM49BQ9NUQ9 324 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 YARS2Q9Y2Z4 477 aaKnown RBP3.83□□□□□ -1.8
SMG1-204ENST00000561940 MROH7-TTC4A0A0A0MT08 1334 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 C4AP0C0L4 1744 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 SZT2Q5T011 3432 aa3.83□□□□□ -1.8
SMG1-204ENST00000561940 ADAMTSL1Q8N6G6 1762 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 NME4O00746 187 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 PLPP1O14494 284 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 SLC25A14O95258 325 aaPredicted RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 POLR2MP0CAP2 368 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 KIR3DL2P43630 455 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 HCAR3P49019 387 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 P2RX1P51575 399 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 RPS23P62266 143 aaKnown RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 ESRRGP62508 458 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 ARG2P78540 354 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 IFT88Q13099 833 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 DGCR6Q14129 220 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 BEX5Q5H9J7 111 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 ZNF691Q5VV52 312 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 PRMT9Q6P2P2 845 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 ZNF547Q8IVP9 402 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 GPR26Q8NDV2 337 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 PIFOQ8TCI5 191 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 KIAA1143Q96AT1 154 aaPredicted RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 RPEQ96AT9 228 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 APH1AQ96BI3 265 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 JSRP1Q96MG2 331 aaPredicted RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 OR2AG1Q9H205 316 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 CYP3A43Q9HB55 503 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 PATZ1Q9HBE1 687 aaKnown RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 MRM3Q9HC36 420 aaKnown RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 CTSFQ9UBX1 484 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 TSSC4Q9Y5U2 329 aaPredicted RBP3.82□□□□□ -1.8
SMG1-204ENST00000561940 C2orf16Q68DN1 1984 aa3.82□□□□□ -1.8
SMG1-204ENST00000561940 WNK3Q9BYP7 1800 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 C5P01031 1676 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 PKD1L2Q7Z442 2459 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 NMT2O60551 498 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 GABRG2P18507 467 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 TCN2P20062 427 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 RAB3AP20336 220 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 USF1P22415 310 aaPredicted RBP3.81□□□□□ -1.8
SMG1-204ENST00000561940 IL32P24001 234 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 CD82P27701 267 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 SSTR5P35346 364 aa3.81□□□□□ -1.8
SMG1-204ENST00000561940 TNFSF9P41273 254 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms