RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DIABLOQ9NR28 239 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 FAIMQ9NVQ4 179 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 FAM215AQ9Y5M1 114 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 URB1O60287 2271 aaKnown RBP14.87□□□□□ -0.03
HDDC3-206ENST00000561036 FREM1Q5H8C1 2179 aa14.87□□□□□ -0.03
HDDC3-206ENST00000561036 hCG_38984A0A1B0GV85 526 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 CIB4A0PJX0 185 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 C5orf49A4QMS7 147 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 J3QW42 95 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 IL2RAP01589 272 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 UBBP0CG47 229 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 FAHP16930 419 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 CDK2P24941 298 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 INPP1P49441 399 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 GSK3AP49840 483 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 FOXF2Q12947 444 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 MALLQ13021 153 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 MADCAM1Q13477 382 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 OR8B8Q15620 311 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 LINC00303Q3SY05 128 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 TMEM69Q5SWH9 247 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 MDP1Q86V88 176 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF584Q8IVC4 421 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 GABRG1Q8N1C3 465 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 C17orf78Q8N4C9 275 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 CISD2Q8N5K1 135 aaKnown RBP14.86□□□□□ -0.03
HDDC3-206ENST00000561036 OR4D6Q8NGJ1 314 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 SPSB1Q96BD6 273 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 CPNE2Q96FN4 548 aaPredicted RBP14.86□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF75AQ96N20 296 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 TECTBQ96PL2 329 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 SLC22A4Q9H015 551 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 TP63Q9H3D4 680 aaPredicted RBP14.86□□□□□ -0.03
HDDC3-206ENST00000561036 OBP2BQ9NPH6 170 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 GHRLQ9UBU3 117 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 RAB22AQ9UL26 194 aa14.86□□□□□ -0.03
HDDC3-206ENST00000561036 IGKV1-9A0A0C4DH69 117 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 PRRG2O14669 202 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 CTAG2O75638 210 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 HCKP08631 526 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 FAM87AP0C7U9 286 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 EDN3P14138 238 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 CEACAM8P31997 349 aaPredicted RBP14.85□□□□□ -0.03
HDDC3-206ENST00000561036 PTH2RP49190 550 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 FAM3AP98173 230 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF92Q03936 586 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 TMEM42Q69YG0 159 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 MZT2BQ6NZ67 158 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 BEND4Q6ZU67 534 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 GDPD3Q7L5L3 318 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 OR2W3Q7Z3T1 314 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 PNLDC1Q8NA58 520 aaKnown RBP14.85□□□□□ -0.03
HDDC3-206ENST00000561036 OR2AE1Q8NHA4 323 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 SMIM4Q8WVI0 70 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 TRIM63Q969Q1 353 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 PHF21AQ96BD5 680 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 SFXN3Q9BWM7 321 aa14.85□□□□□ -0.03
HDDC3-206ENST00000561036 MRPS7Q9Y2R9 242 aaKnown RBP14.85□□□□□ -0.03
HDDC3-206ENST00000561036 DOCK7Q96N67 2140 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 GGT3PA6NGU5 568 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 GABARAPH6UMI1 98 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 PLA2G10O15496 165 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 RAD51DO75771 328 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 LYZL6O75951 148 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 SCGNO76038 276 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 TOXO94900 526 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 PRKACBP22694 351 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ACKR3P25106 362 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 HOXC12P31275 282 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ALDH3B1P43353 468 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 TAS2R20P59543 309 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 MRPL49Q13405 166 aaKnown RBP14.84□□□□□ -0.03
HDDC3-206ENST00000561036 CNN3Q15417 329 aaKnown RBP14.84□□□□□ -0.03
HDDC3-206ENST00000561036 TAB1Q15750 504 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 UBE2V2Q15819 145 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 FAM189A2Q15884 450 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 TBC1D28Q2M2D7 210 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 CLVS2Q5SYC1 327 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 C1QTNF12Q5T7M4 302 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 RAB12Q6IQ22 244 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 KRT74Q7RTS7 529 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 DTX3Q8N9I9 347 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF610Q8N9Z0 462 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 SLC30A7Q8NEW0 376 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 OR5L1Q8NGL2 311 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 YIPF5Q969M3 257 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 REPIN1Q9BWE0 567 aaKnown RBP14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF835Q9Y2P0 537 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ACACAQ13085 2346 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 CACNA1GO43497 2377 aa14.84□□□□□ -0.03
HDDC3-206ENST00000561036 ZNF816-ZNF321PA0A0X1KG74 233 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 METTL21EPA6NDL7 271 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 EEF1E1O43324 174 aaKnown RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 ICMTO60725 284 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 CBR1P16152 277 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 ZNF14P17017 642 aaPredicted RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 EFNB2P52799 333 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 QRFPP83859 136 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 TNK1Q13470 666 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 KISS1Q15726 138 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms