RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 BEX5Q5H9J7 111 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 Q5W150 140 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 APRG1Q8IVJ8 170 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 MICU2Q8IYU8 434 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 CHST4Q8NCG5 386 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 UBALD1Q8TB05 177 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 C15orf40Q8WUR7 153 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 APH1BQ8WW43 257 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 BEX1Q9HBH7 125 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 ACP6Q9NPH0 428 aa3.34□□□□□ -1.87
MARK3-220ENST00000560417 RTL9Q8NET4 1388 aa3.34□□□□□ -1.88
MARK3-220ENST00000560417 BRCA2P51587 3418 aa3.34□□□□□ -1.88
MARK3-220ENST00000560417 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 IGKV6D-21A0A0A0MT36 114 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 NCF1BA6NI72 391 aaPredicted RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 NCF1CA8MVU1 366 aaPredicted RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 GOLGA8TH3BQL2 631 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 M0R3G1 203 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 GCM2O75603 506 aaPredicted RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 FCN3O75636 299 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 LSM8O95777 96 aaKnown RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 RAB3AP20336 220 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 NBL1P41271 181 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 C1QTNF8P60827 252 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 UBE2NP61088 152 aaKnown RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 PPP1CBP62140 327 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 SPAG1Q07617 926 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 SYCNQ0VAF6 134 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 IFT88Q13099 833 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 NCF4Q15080 339 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 AVPI1Q5T686 147 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 GLYATL2Q8WU03 294 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 PDXPQ96GD0 296 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 OPALINQ96PE5 141 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 SPNS1Q9H2V7 528 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 HMG20AQ9NP66 347 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 CTSFQ9UBX1 484 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 PSME2Q9UL46 239 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 IGSF9BQ9UPX0 1349 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 COL1A1P02452 1464 aaPredicted RBP3.33□□□□□ -1.88
MARK3-220ENST00000560417 PSME4Q14997 1843 aa3.33□□□□□ -1.88
MARK3-220ENST00000560417 A0A0U1RQV1 116 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 GOLGA6L7A0A1B0GV03 622 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 A0A1W2PP18 115 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 RSPH10B2B2RC85 870 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 H7C417 338 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 BCKDKO14874 412 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 CTDNEP1O95476 244 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 RSPH10BP0C881 870 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 STAG3L3P0CL85 134 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 ERGP11308 486 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 PSMC3P17980 439 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 CSNK2A2P19784 350 aaPredicted RBP3.32□□□□□ -1.88
MARK3-220ENST00000560417 RAB4AP20338 218 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 P2RX1P51575 399 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 CLDN18P56856 261 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 UBE2MP61081 183 aaKnown RBP3.32□□□□□ -1.88
MARK3-220ENST00000560417 RAD51Q06609 339 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 TPTE2P1Q5T6R2 138 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 WDR86Q86TI4 376 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 PRSS58Q8IYP2 241 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 METTL13Q8N6R0 699 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 PIFOQ8TCI5 191 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 PEX13Q92968 403 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 JSRP1Q96MG2 331 aaPredicted RBP3.32□□□□□ -1.88
MARK3-220ENST00000560417 NDFIP1Q9BT67 221 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 ZNF430Q9H8G1 570 aaPredicted RBP3.32□□□□□ -1.88
MARK3-220ENST00000560417 AHSPQ9NZD4 102 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 ZNRD1Q9P1U0 126 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 MTFP1Q9UDX5 166 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 SAR1BQ9Y6B6 198 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 GAKO14976 1311 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 ZBED9Q6R2W3 1325 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 SCN4AP35499 1836 aa3.32□□□□□ -1.88
MARK3-220ENST00000560417 CENPFP49454 3210 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 NUP214P35658 2090 aaPredicted RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 DOCK9Q9BZ29 2069 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 ARAP2Q8WZ64 1704 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 A0A1B0GTQ1 180 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 TSPAN11A1L157 253 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 SUPT3HB4E1H0 165 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 L7N2F9 121 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 MAGEB4O15481 346 aaPredicted RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 AKR7A2O43488 359 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 YIF1AO95070 293 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 WISP3O95389 354 aaPredicted RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 IGKV3-11P04433 115 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 IFNW1P05000 195 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 UBCP0CG48 685 aaKnown RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 SSTR5P35346 364 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 SLC1A2P43004 574 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 HCAR3P49019 387 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 CLDN8P56748 225 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 ZNF121P58317 390 aaPredicted RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 RPS15AP62244 130 aaKnown RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 EIF4EBP2Q13542 120 aaPredicted RBP3.31□□□□□ -1.88
MARK3-220ENST00000560417 KIR2DS1Q14954 304 aa3.31□□□□□ -1.88
MARK3-220ENST00000560417 TRMT5Q32P41 509 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms