RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ERVK-25P63136 954 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 GPR50Q13585 617 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 KRR1Q13601 381 aaKnown RBP11.53□□□□□ -0.56
SMAD3-214ENST00000560402 TPBGQ13641 420 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 GALEQ14376 348 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MBNL2Q5VZF2 373 aaKnown RBP11.53□□□□□ -0.56
SMAD3-214ENST00000560402 LEG1Q6P5S2 330 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 SHFQ7M4L6 423 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 C1QL2Q7Z5L3 287 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 LHFPL3Q86UP9 236 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 IGFN1Q86VF2 1251 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 OR2T27Q8NH04 317 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MOSPD2Q8NHP6 518 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 TBC1D15Q8TC07 691 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 RAB1CQ92928 201 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 POM121L2Q96KW2 1035 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 DIRC2Q96SL1 478 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MNTQ99583 582 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MMP27Q9H306 513 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 MED20Q9H944 212 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 PALMDQ9NP74 551 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 WIPI2Q9Y4P8 454 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 UGT2A1Q9Y4X1 527 aa11.53□□□□□ -0.56
SMAD3-214ENST00000560402 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.56
SMAD3-214ENST00000560402 TEX13CA0A0J9YWL9 993 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 CCDC182A6NF36 153 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 A6NIZ1 184 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 MPZL1O95297 269 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 HLA-DPB1P04440 258 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 GALP22466 123 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 SLC2A5P22732 501 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 GUCA1AP43080 201 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 RAP1BP61224 184 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 PCBD1P61457 104 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 RAP1AP62834 184 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 ACTG1P63261 375 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 GLO1Q04760 184 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 FHL1Q13642 323 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF829Q3KNS6 432 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF404Q494X3 552 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 AVPI1Q5T686 147 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 FAM27BQ5VT28 67 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 FAHD2BQ6P2I3 314 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF322Q6U7Q0 402 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 EGFL6Q8IUX8 553 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 CYB561A3Q8NBI2 242 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 RPL3LQ92901 407 aaKnown RBP11.52□□□□□ -0.57
SMAD3-214ENST00000560402 PTP4A1Q93096 173 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 FAHD2AQ96GK7 314 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 WACQ9BTA9 647 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 SUCNR1Q9BXA5 334 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 EGLN1Q9GZT9 426 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 OR51E2Q9H255 320 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 PCDHB10Q9UN67 800 aa11.52□□□□□ -0.57
SMAD3-214ENST00000560402 DYSFO75923 2080 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 C5orf49A4QMS7 147 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF670-ZNF695F2Z2N8 137 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 PHYHO14832 338 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 GLCEO94923 617 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 CST2P09228 141 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SPI1P17947 270 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 CCNOP22674 350 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 CDAP32320 146 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 WNT5AP41221 380 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 MMP15P51511 669 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 RPL27P61353 136 aaKnown RBP11.51□□□□□ -0.57
SMAD3-214ENST00000560402 FMODQ06828 376 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 MRPL28Q13084 256 aaKnown RBP11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SSX1Q16384 188 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SGCAQ16586 387 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 THEM4Q5T1C6 240 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 OR2G6Q5TZ20 316 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 DCAF12L2Q5VW00 463 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 DNM1P34Q6PK57 102 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SLC25A47Q6Q0C1 308 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ARL9Q6T311 187 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 FOXL2NBQ6ZUU3 175 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 SPRYD4Q8WW59 207 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-214ENST00000560402 MARS2Q96GW9 593 aaKnown RBP11.51□□□□□ -0.57
SMAD3-214ENST00000560402 KCTD7Q96MP8 289 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 RBP7Q96R05 134 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 GAL3ST1Q99999 423 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 TMPRSS13Q9BYE2 586 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ELOVL3Q9HB03 270 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ADGRL4Q9HBW9 690 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 BABAM2Q9NXR7 383 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ZDHHC8Q9ULC8 765 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 PEX16Q9Y5Y5 336 aa11.51□□□□□ -0.57
SMAD3-214ENST00000560402 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
SMAD3-214ENST00000560402 LOC105371242A0A075B767 164 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms