RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 FAHD2BQ6P2I3 314 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 KCTD18Q6PI47 426 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 C10orf67Q8IYJ2 551 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF418Q8TF45 676 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 FAHD2AQ96GK7 314 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 RBM4BQ9BQ04 359 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 ADAT1Q9BUB4 502 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF391Q9UJN7 358 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 LRP12Q9Y561 859 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 TMEM14AQ9Y6G1 99 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 DYSFO75923 2080 aa12.73□□□□□ -0.37
SNRPA1-210ENST00000560383 ACOD1A6NK06 481 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 SAC3D1A6NKF1 404 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 M0R129 80 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 VENTXO95231 258 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 CYB5R3P00387 301 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 ALPLP05186 524 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 GSK3AP49840 483 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 OR8B8Q15620 311 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 MPPED2Q15777 294 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 C1orf229Q6ZS94 237 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 C1QL2Q7Z5L3 287 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 C1orf87Q8N0U7 546 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 ASB17Q8WXJ9 295 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 ITFG2Q969R8 447 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 CNN2Q99439 309 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 MNTQ99583 582 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 ADGRL4Q9HBW9 690 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 USE1Q9NZ43 259 aa12.72□□□□□ -0.37
SNRPA1-210ENST00000560383 IGHV3-64DA0A0J9YX35 117 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 ANKRD30BLA7E2S9 258 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 A8MXK9 166 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 PRR32B1ATL7 298 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 E9PQ18 207 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 FAM20BO75063 409 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF254O75437 659 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 FOXH1O75593 365 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 EPHA1P21709 976 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 ZFP36P26651 326 aaKnown RBP12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 HILS1P60008 231 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 MZT1Q08AG7 82 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 DCAF12L2Q5VW00 463 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 KRT77Q7Z794 578 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 GID4Q8IVV7 300 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 OR8J1Q8NGP2 316 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 OR11L1Q8NGX0 322 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 PGAM5Q96HS1 289 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 OR8B4Q96RC9 309 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 IL4I1Q96RQ9 567 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 MROQ9BYG7 248 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 FAM206AQ9NX38 181 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 H2AFY2Q9P0M6 372 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 PCDHB10Q9UN67 800 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 COPS3Q9UNS2 423 aa12.71□□□□□ -0.37
SNRPA1-210ENST00000560383 WNK2Q9Y3S1 2297 aa12.71□□□□□ -0.38
SNRPA1-210ENST00000560383 LOC105371242A0A075B767 164 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 AVPP01185 164 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 WNT2P09544 360 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 SNCBQ16143 134 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 OR8B12Q8NGG6 310 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 RIBC2Q9H4K1 309 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 FN3KRPQ9HA64 309 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 BRD7Q9NPI1 651 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 UFSP2Q9NUQ7 469 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 C14orf119Q9NWQ9 140 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 CLN6Q9NWW5 311 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 WARS2Q9UGM6 360 aaKnown RBP12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 PPIAL4AQ9Y536 164 aa12.7□□□□□ -0.38
SNRPA1-210ENST00000560383 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 A0A0U1RQV5 110 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 TMEM269A0A1B0GVZ9 245 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 EI24O14681 340 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 PHYHO14832 338 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 CST4P01036 141 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 IGLV3-1P01715 115 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 IRF2P14316 349 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 ACKR3P25106 362 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 HTR1FP30939 366 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 COMPP49747 757 aaPredicted RBP12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 ALDH3A2P51648 485 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 LCN2P80188 198 aa12.69□□□□□ -0.38
SNRPA1-210ENST00000560383 TMED1Q13445 227 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms