RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZBTB37Q5TC79 503 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 TMEM244Q5VVB8 128 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 TMEM42Q69YG0 159 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 Q6ZR03 302 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 MUC15Q8N387 334 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 FCGR1BQ92637 280 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 MGLLQ99685 303 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 CCDC90BQ9GZT6 254 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 CGGBP1Q9UFW8 167 aaPredicted RBP12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 POU2F3Q9UKI9 436 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 CCDC168Q8NDH2 2452 aa12.65□□□□□ -0.38
SNRPA1-207ENST00000559309 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 LOC107986453A0A1B0GWG9 222 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 TBX1O43435 398 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 LILRA1O75019 489 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 DHRS3O75911 302 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 PAX1P15863 534 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 SELEP16581 610 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 FABP6P51161 128 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 MED22Q15528 200 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 TIGD6Q17RP2 521 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 DOK3Q7L591 496 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 OR10AC1Q8NH08 325 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 MUL1Q969V5 352 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 PDCD1LG2Q9BQ51 273 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 SLC30A2Q9BRI3 323 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 FBXO9Q9UK97 447 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 DSCAMO60469 2012 aa12.64□□□□□ -0.39
SNRPA1-207ENST00000559309 P2RY10O00398 339 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 CST4P01036 141 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 GCH1P30793 250 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 PPOXP50336 477 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 GP2P55259 537 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 SSX1Q16384 188 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 ASPHD2Q6ICH7 369 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 OR2T2Q6IF00 324 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 VHLLQ6RSH7 139 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 UNQ9370/PRO34162Q6UXP9 181 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 PHC2Q8IXK0 858 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 OR8G5Q8NG78 346 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 OR51A4Q8NGJ6 313 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 GHSRQ92847 366 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 C10orf35Q96D05 121 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 FZR1Q9UM11 496 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF281Q9Y2X9 895 aa12.63□□□□□ -0.39
SNRPA1-207ENST00000559309 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 H7C417 338 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 INMTO95050 263 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 PTBP3O95758 552 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 CELP19835 753 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 LIPAP38571 399 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 PRSS12P56730 875 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 YIF1BQ5BJH7 314 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 PAMR1Q6UXH9 720 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 KCTD8Q6ZWB6 473 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 FBXL14Q8N1E6 418 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 UBASH3BQ8TF42 649 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 LIME1Q9H400 295 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 NKIRAS2Q9NYR9 191 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 ZFHX3Q15911 3703 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 MTORP42345 2549 aa12.62□□□□□ -0.39
SNRPA1-207ENST00000559309 HIVEP1P15822 2718 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 CHD3Q12873 2000 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 SETD2Q9BYW2 2564 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 ZSCAN5BA6NJL1 495 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 MLNRO43193 412 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 SYT7O43581 403 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 GPX5O75715 221 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 TFAP2AP05549 437 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 CD55P08174 381 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF12P17014 697 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 MAP2K3P46734 347 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 MOGQ16653 247 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 TMEM200AQ86VY9 491 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 PARP16Q8N5Y8 322 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF676Q8N7Q3 588 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 ZFP41Q8N8Y5 198 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 CSNK2A3Q8NEV1 391 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 PIGTQ969N2 578 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 UBTD1Q9HAC8 227 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
SNRPA1-207ENST00000559309 ZNF275Q9NSD4 429 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms