RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RHBDD3Q9Y3P4 386 aa9.25□□□□□ -0.93
TPM1-217ENST00000559108 PCDHGB1Q9Y5G3 927 aa9.25□□□□□ -0.93
TPM1-217ENST00000559108 SNX5Q9Y5X3 404 aa9.25□□□□□ -0.93
TPM1-217ENST00000559108 A0A096LNT2 108 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 A0A0U1RQV5 110 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 F5H5P2 479 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 RP2O75695 350 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 ADH4P08319 380 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CCDC159P0C7I6 412 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CCL1P22362 96 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 TUBG1P23258 451 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CA6P23280 308 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 COL8A2P25067 703 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 MAP2K4P45985 399 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 ZNF81P51508 661 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CDH15P55291 814 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CCL8P80075 99 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 MALLQ13021 153 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 MAB21L1Q13394 359 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 Q5PR19 223 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 ASPHD2Q6ICH7 369 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 Q6ZSR3 168 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 C1orf174Q8IYL3 243 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 ZNF540Q8NDQ6 660 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 OR13C5Q8NGS8 318 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 OR14K1Q8NGZ2 314 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 HPSE2Q8WWQ2 592 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 GATAD2BQ8WXI9 593 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 COG8Q96MW5 612 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 PDCD1LG2Q9BQ51 273 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 CXorf56Q9H5V9 222 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 TUBG2Q9NRH3 451 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 TREM2Q9NZC2 230 aa9.24□□□□□ -0.93
TPM1-217ENST00000559108 IGHV4-30-2A0A087WSY4 118 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 LOC107986453A0A1B0GWG9 222 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 TRIM64A6NGJ6 449 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 GGT3PA6NGU5 568 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 TRIM64BA6NI03 449 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 ACOD1A6NK06 481 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 SSX4O60224 188 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 ZFPL1O95159 310 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 F12P00748 615 aaPredicted RBP9.23□□□□□ -0.93
TPM1-217ENST00000559108 APOC1P02654 83 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 CD55P08174 381 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 FAHP16930 419 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 PMELP40967 661 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 EFNA4P52798 201 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 ACTA2P62736 377 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 ACTG2P63267 376 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 PRAMEF6Q5VXH4 476 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 UNQ6126/PRO20091Q6UXV3 157 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 RNF144BQ7Z419 303 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 FAM220AQ7Z4H9 259 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 LRRC75A-AS1Q8N1F1 130 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 CIARTQ8N365 385 aaPredicted RBP9.23□□□□□ -0.93
TPM1-217ENST00000559108 NANOGP1Q8N7R0 232 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 OR2Z1Q8NG97 314 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 OR52N1Q8NH53 320 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 ITLN1Q8WWA0 313 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 CDCA4Q9BXL8 241 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 MOB1AQ9H8S9 216 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 CAB39Q9Y376 341 aaPredicted RBP9.23□□□□□ -0.93
TPM1-217ENST00000559108 EXOSC1Q9Y3B2 195 aaKnown RBP9.23□□□□□ -0.93
TPM1-217ENST00000559108 V9GYS6 101 aa9.23□□□□□ -0.93
TPM1-217ENST00000559108 FLNAP21333 2647 aaKnown RBP9.22□□□□□ -0.93
TPM1-217ENST00000559108 MAP1AP78559 2803 aaPredicted RBP9.22□□□□□ -0.93
TPM1-217ENST00000559108 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 WNT9BO14905 357 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 CDC14BO60729 498 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 THBS2P35442 1172 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 ALKBH1Q13686 389 aaKnown RBP9.22□□□□□ -0.93
TPM1-217ENST00000559108 CDK5R1Q15078 307 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 MPPED2Q15777 294 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 KRT74Q7RTS7 529 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 KCTD20Q7Z5Y7 419 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 STX19Q8N4C7 294 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 KLHL36Q8N4N3 616 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 ORAI1Q96D31 301 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 ITPKCQ96DU7 683 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 ADAT3Q96EY9 351 aaPredicted RBP9.22□□□□□ -0.93
TPM1-217ENST00000559108 ELMOD3Q96FG2 381 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 PGLYRP3Q96LB9 341 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 OR2V2Q96R30 315 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 RASSF4Q9H2L5 321 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 MS4A5Q9H3V2 200 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 RGCCQ9H4X1 137 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 LRRC42Q9Y546 428 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 PMF1-BGLAPU3KQ54 211 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 CELSR1Q9NYQ6 3014 aa9.22□□□□□ -0.93
TPM1-217ENST00000559108 PLSCR5A0PG75 271 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 IRGMA1A4Y4 181 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 ZNF850A8MQ14 1090 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 VSTM5A8MXK1 200 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 OGG1O15527 345 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 RGS10O43665 173 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 DHRS3O75911 302 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 MT-ND5P03915 603 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 DAOP14920 347 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms