RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 MAGEB1P43366 347 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 CENPAP49450 140 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 LINC00205P59089 165 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SELENOVP59797 346 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 CBX1P83916 185 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 RAB35Q15286 201 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 GSG1Q2KHT4 349 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 ELFN2Q5R3F8 820 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FAM27BQ5VT28 67 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 AGAP6Q5VW22 663 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SHEQ5VZ18 495 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 LCN8Q6JVE9 175 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 LEG1Q6P5S2 330 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 TMEM154Q6P9G4 183 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SMARCD3Q6STE5 483 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 Q6ZR03 302 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FOXL2NBQ6ZUU3 175 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 IL17RELQ6ZVW7 336 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 ZNF771Q7L3S4 317 aaPredicted RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 RRM2BQ7LG56 351 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 CYP4Z1Q86W10 505 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FBXL14Q8N1E6 418 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 LRRC75A-AS1Q8N1F1 130 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 C17orf78Q8N4C9 275 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 LINC00471Q8N535 108 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 NPEPL1Q8NDH3 523 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 ICA1LQ8NDH6 482 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 DNAAF1Q8NEP3 725 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SDR9C7Q8NEX9 313 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 OR10S1Q8NGN2 331 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SLC25A40Q8TBP6 338 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 GNPDA2Q8TDQ7 276 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 RAB40AQ8WXH6 277 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 RBP7Q96R05 134 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 AMELYQ99218 206 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FEVQ99581 238 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 TSSK6Q9BXA6 273 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 OR2H1Q9GZK4 316 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 OR2J1Q9GZK6 312 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 POLR2J2Q9GZM3 115 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 FAM234AQ9H0X4 552 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 POLR2J3Q9H1A7 115 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 SYT4Q9H2B2 425 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 PLK3Q9H4B4 646 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 DENND2DQ9H6A0 471 aaPredicted RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 WDR76Q9H967 626 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SIAEQ9HAT2 523 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 POLE4Q9NR33 117 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 ARMC1Q9NVT9 282 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 AASSQ9UDR5 926 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SLC7A8Q9UHI5 535 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 GTF2A1LQ9UNN4 478 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 SAMD4AQ9UPU9 718 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 AURKCQ9UQB9 309 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 AP3M1Q9Y2T2 418 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 FAM32AQ9Y421 112 aaKnown RBP3.59□□□□□ -1.83
SPG11-211ENST00000558561 LHFPL6Q9Y693 200 aa3.59□□□□□ -1.83
SPG11-211ENST00000558561 NF1P21359 2839 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 DOCK11Q5JSL3 2073 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 TCRBV3S1A0A5B6 114 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 C5orf49A4QMS7 147 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 GAGE12JA6NER3 117 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ANKRD65E5RJM6 399 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 M0R129 80 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 BHLHE40O14503 412 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 MAGEB4O15481 346 aaPredicted RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 GYG2O15488 501 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 FKBP6O75344 327 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 GOSR1O95249 250 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 STAMBPO95630 424 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 TXNDC12O95881 172 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 CST1P01037 141 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 IGF2P01344 180 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 CRYAAP02489 173 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 NPR2P20594 1047 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 STOMP27105 288 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 GLRXP35754 106 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 GGT2P36268 569 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 DAPP51397 102 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 UCP2P55851 309 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 VAMP2P63027 116 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 CHRNB3Q05901 458 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 TSPAN31Q12999 210 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 PSG7Q13046 419 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 KRR1Q13601 381 aaKnown RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 CARTPTQ16568 116 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 TSTQ16762 297 aaKnown RBP3.58□□□□□ -1.84
SPG11-211ENST00000558561 MICAQ29983 383 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 DMRTC1Q5HYR2 192 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 LINC01590Q5TEZ4 76 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 OR2T5Q6IEZ7 315 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 ZNF544Q6NX49 715 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 PRSS57Q6UWY2 283 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 DPY19L2P2Q6ZN68 376 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 CFAP77Q6ZQR2 320 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 Q6ZTK2 550 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 RFPL4BQ6ZWI9 263 aa3.58□□□□□ -1.84
SPG11-211ENST00000558561 MOB3CQ70IA8 216 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms