RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 HAVCR1Q96D42 359 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 MARS2Q96GW9 593 aaKnown RBP12.81□□□□□ -0.36
VPS18-202ENST00000558474 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
VPS18-202ENST00000558474 DCSTAMPQ9H295 470 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 ABCB9Q9NP78 766 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 PTTG3PQ9NZH4 202 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 PIGLQ9Y2B2 252 aa12.81□□□□□ -0.36
VPS18-202ENST00000558474 ZNF816-ZNF321PA0A0X1KG74 233 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 VSTM5A8MXK1 200 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 ERCC1P07992 297 aaPredicted RBP12.8□□□□□ -0.36
VPS18-202ENST00000558474 FAM157BP0CG42 384 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 SERPINB10P48595 397 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 BSPH1Q075Z2 132 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 SPCS2Q15005 226 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 TMEM42Q69YG0 159 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
VPS18-202ENST00000558474 ALKBH2Q6NS38 261 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 CDH26Q8IXH8 852 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 LINC01560Q8TB33 94 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 SLC25A40Q8TBP6 338 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 PIGTQ969N2 578 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 OR2J1Q9GZK6 312 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 CHST5Q9GZS9 411 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
VPS18-202ENST00000558474 ZCCHC4Q9H5U6 513 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
VPS18-202ENST00000558474 DIDO1Q9BTC0 2240 aaKnown RBP12.8□□□□□ -0.36
VPS18-202ENST00000558474 HEATR1Q9H583 2144 aaKnown RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 ANKRD61A6NGH8 418 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 GGT3PA6NGU5 568 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ABCD4O14678 606 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 CDRT1O95170 752 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 CST4P01036 141 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ALDOBP05062 364 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 CD3EP07766 207 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ZNF250P15622 560 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 KITLGP21583 273 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 GCH1P30793 250 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 SDC2P34741 201 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 KIR2DL3P43628 341 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 PPP3R1P63098 170 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 SNTB2Q13425 540 aaKnown RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 TNK1Q13470 666 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 CLVS2Q5SYC1 327 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 DMRTC2Q8IXT2 367 aaPredicted RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 NKAIN3Q8N8D7 197 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ACBD4Q8NC06 268 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 KLF14Q8TD94 323 aaPredicted RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 SSC4DQ8WTU2 575 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ADAT3Q96EY9 351 aaPredicted RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 SOX7Q9BT81 388 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 SLC22A4Q9H015 551 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 RNF167Q9H6Y7 350 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 MRPL15Q9P015 296 aaKnown RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 CCDC59Q9P031 241 aaKnown RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 KCNN3Q9UGI6 736 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 SMG1Q96Q15 3661 aaKnown RBP12.79□□□□□ -0.36
VPS18-202ENST00000558474 NBASA2RRP1 2371 aa12.79□□□□□ -0.36
VPS18-202ENST00000558474 ZFYVE26Q68DK2 2539 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 A0A1W2PPK0 400 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CLEC18AA5D8T8 446 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 SULT1B1O43704 296 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CD37P11049 281 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 RAB3AP20336 220 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 RAB3BP20337 219 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 ACKR3P25106 362 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CFPP27918 469 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 SOX6P35712 828 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 MAGEB1P43366 347 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 RORCP51449 518 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 SELENOVP59797 346 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 HLXQ14774 488 aaPredicted RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 MOGQ16653 247 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CNPY1Q3B7I2 92 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 FAM27D1Q5T7N8 215 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CLEC18BQ6UXF7 455 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 CLEC18CQ8NCF0 446 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 SLC25A46Q96AG3 418 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 FOXRED1Q96CU9 486 aaPredicted RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CPNE2Q96FN4 548 aaPredicted RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 POFUT1Q9H488 388 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 TMEM138Q9NPI0 162 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 NOP16Q9Y3C1 178 aaKnown RBP12.78□□□□□ -0.36
VPS18-202ENST00000558474 MPC1Q9Y5U8 109 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
VPS18-202ENST00000558474 IGLV3-9A0A075B6K5 115 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.37
VPS18-202ENST00000558474 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
VPS18-202ENST00000558474 H3BSH0 61 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms