RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 P2RY6Q15077 328 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 GABRA6Q16445 453 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 ZBTB37Q5TC79 503 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 VWA1Q6PCB0 445 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 SEM1Q6ZVN7 128 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 MDP1Q86V88 176 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 CISD2Q8N5K1 135 aaKnown RBP10.84□□□□□ -0.67
SHMT2-233ENST00000557529 DTX3Q8N9I9 347 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 OR2AE1Q8NHA4 323 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-233ENST00000557529 SLC22A4Q9H015 551 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 TP63Q9H3D4 680 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-233ENST00000557529 OPA3Q9H6K4 179 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 CNTD2Q9H8S5 307 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 FAIMQ9NVQ4 179 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 TBCCD1Q9NVR7 557 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 MRPS7Q9Y2R9 242 aaKnown RBP10.84□□□□□ -0.67
SHMT2-233ENST00000557529 RHBDD3Q9Y3P4 386 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 CACNA1GO43497 2377 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 ARHGAP21Q5T5U3 1957 aa10.84□□□□□ -0.67
SHMT2-233ENST00000557529 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 A0A0A6YYH2 397 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 hCG_38984A0A1B0GV85 526 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 A6NJ64 397 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 J3QW42 95 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 PRRG2O14669 202 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 LDLRAD4O15165 306 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 XRCC3O43542 346 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 CTAG2O75638 210 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 RAD51DO75771 328 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 LYZL6O75951 148 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 CGAP01215 116 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 UBBP0CG47 229 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 EDN3P14138 238 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 CCNOP22674 350 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 PRKACBP22694 351 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 CDK2P24941 298 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 GSK3AP49840 483 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 OR8B8Q15620 311 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 LINC00303Q3SY05 128 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 MZT2BQ6NZ67 158 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 BEND4Q6ZU67 534 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 GABRG1Q8N1C3 465 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 C17orf78Q8N4C9 275 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 PNLDC1Q8NA58 520 aaKnown RBP10.83□□□□□ -0.68
SHMT2-233ENST00000557529 OR4D6Q8NGJ1 314 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 SMIM4Q8WVI0 70 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 STARD4Q96DR4 205 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 TECTBQ96PL2 329 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 OBP2BQ9NPH6 170 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 FBLN5Q9UBX5 448 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 RAB22AQ9UL26 194 aa10.83□□□□□ -0.68
SHMT2-233ENST00000557529 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-233ENST00000557529 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 EEF1E1O43324 174 aaKnown RBP10.82□□□□□ -0.68
SHMT2-233ENST00000557529 SCGNO76038 276 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ACKR3P25106 362 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 PTH2RP49190 550 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 TAS2R20P59543 309 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 FAM3AP98173 230 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF92Q03936 586 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 MRPL49Q13405 166 aaKnown RBP10.82□□□□□ -0.68
SHMT2-233ENST00000557529 CNN3Q15417 329 aaKnown RBP10.82□□□□□ -0.68
SHMT2-233ENST00000557529 FAM189A2Q15884 450 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 TBC1D28Q2M2D7 210 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 CLVS2Q5SYC1 327 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF57Q68EA5 555 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-233ENST00000557529 TMEM42Q69YG0 159 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 AWAT2Q6E213 333 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 GDPD3Q7L5L3 318 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 OR2W3Q7Z3T1 314 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ANGPTL5Q86XS5 388 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF584Q8IVC4 421 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 IZUMO1Q8IYV9 350 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 OR5L1Q8NGL2 311 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 SSC4DQ8WTU2 575 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 GPER1Q99527 375 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 SFXN3Q9BWM7 321 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 GHRLQ9UBU3 117 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 MRPS28Q9Y2Q9 187 aaKnown RBP10.82□□□□□ -0.68
SHMT2-233ENST00000557529 PIEZO1Q92508 2521 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 PTPRQQ9UMZ3 2332 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 DOCK7Q96N67 2140 aa10.82□□□□□ -0.68
SHMT2-233ENST00000557529 ZNF816-ZNF321PA0A0X1KG74 233 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 LINC00854A0A1B0GVQ3 168 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 METTL21EPA6NDL7 271 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 GGT3PA6NGU5 568 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 GABARAPH6UMI1 98 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 PLA2G10O15496 165 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 TOXO94900 526 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 CEACAM8P31997 349 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-233ENST00000557529 EFNB2P52799 333 aa10.81□□□□□ -0.68
SHMT2-233ENST00000557529 RBPJQ06330 500 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms