RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 IFNGP01579 166 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 CLUP10909 449 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 GRK5P34947 590 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 FAM3AP98173 230 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
TUBB3-213ENST00000557262 PDCD1Q15116 288 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 RUSC1-AS1Q66K80 236 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TREML4Q6UXN2 200 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TMEM86BQ8N661 226 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 OR6K6Q8NGW6 343 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 GATAD2BQ8WXI9 593 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 RNPEPL1Q9HAU8 725 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 BEX1Q9HBH7 125 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 SMURF1Q9HCE7 757 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 KAAG1Q9UBP8 84 aa13.16□□□□□ -0.3
TUBB3-213ENST00000557262 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 B2RBV5 119 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 DVL1O14640 695 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 SOX14O95416 240 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 APOC1P02654 83 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 ANXA2P07355 339 aaKnown RBP13.15□□□□□ -0.3
TUBB3-213ENST00000557262 CX3CR1P49238 355 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 ARF6P62330 175 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 POU4F2Q12837 409 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 TIGD6Q17RP2 521 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 OR2T5Q6IEZ7 315 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
TUBB3-213ENST00000557262 BTN2A1Q7KYR7 527 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 RHOUQ7L0Q8 258 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 SLC16A9Q7RTY1 509 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 DHFR2Q86XF0 187 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 OR2T29Q8NH02 315 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 SIRPDQ9H106 197 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 REEP1Q9H902 201 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 MARCH7Q9H992 704 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 ACOXLQ9NUZ1 547 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 SAMHD1Q9Y3Z3 626 aaKnown RBP13.15□□□□□ -0.3
TUBB3-213ENST00000557262 POMT1Q9Y6A1 747 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 U3KQV3 271 aa13.15□□□□□ -0.3
TUBB3-213ENST00000557262 IGHV1-69DA0A0B4J2H0 117 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 RIIAD1A6NNX1 92 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 KCNAB3O43448 404 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 KNG1P01042 644 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 IGHV1-69P01742 117 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 MELTFP08582 738 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 MUC1P15941 1255 aaPredicted RBP13.14□□□□□ -0.31
TUBB3-213ENST00000557262 ZNF3P17036 446 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 CFL1P23528 166 aaKnown RBP13.14□□□□□ -0.31
TUBB3-213ENST00000557262 HSD11B1P28845 292 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 GNGT1P63211 74 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
TUBB3-213ENST00000557262 MICBQ29980 383 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 FAM98BQ52LJ0 330 aaKnown RBP13.14□□□□□ -0.31
TUBB3-213ENST00000557262 CD300LDQ6UXZ3 194 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 SHFQ7M4L6 423 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 DPY19L4Q7Z388 723 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 OR1M1Q8NGA1 313 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 OR52H1Q8NGJ2 320 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 TBC1D15Q8TC07 691 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 RNF133Q8WVZ7 376 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 REEP6Q96HR9 211 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 ABHD6Q9BV23 337 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 CHIAQ9BZP6 476 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 CMC2Q9NRP2 79 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 VNN3Q9NY84 501 aa13.14□□□□□ -0.31
TUBB3-213ENST00000557262 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 FCN3O75636 299 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 TIPRLO75663 272 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 NDUFA7O95182 113 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 GSTT1P30711 240 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 NAA10P41227 235 aaPredicted RBP13.13□□□□□ -0.31
TUBB3-213ENST00000557262 GYS2P54840 703 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 RAG2P55895 527 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 MS4A2Q01362 244 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 LCN8Q6JVE9 175 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 FAM57BQ71RH2 274 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 PRSS45Q7RTY3 260 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
TUBB3-213ENST00000557262 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 LRRC29Q8WV35 223 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 SSMEM1Q8WWF3 244 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 LHX4Q969G2 390 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 NSL1Q96IY1 281 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 MED20Q9H944 212 aa13.13□□□□□ -0.31
TUBB3-213ENST00000557262 C1RLQ9NZP8 487 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms