RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 ZNF251Q9BRH9 671 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 FAM234AQ9H0X4 552 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TMPRSS5Q9H3S3 457 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 KIR2DS5A0A0G2JLQ3 304 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 A0A0G2JNG1 304 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF98A6NK75 572 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 KIR2DS3K7RE56 304 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CFIP05156 583 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 HPNP05981 417 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OTX2P32243 289 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PPP1CAP62136 330 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF266Q14584 549 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 KIR2DS5Q14953 304 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR5L2Q8NGL0 311 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LIN37Q96GY3 246 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLX1AQ9BQ83 275 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PRSS27Q9BQR3 290 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PIGQQ9BRB3 760 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ABHD6Q9BV23 337 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PLEKHA3Q9HB20 300 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 GAR1Q9NY12 217 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 GHRLQ9UBU3 117 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SERGEFQ9UGK8 458 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RPH3ALQ9UNE2 315 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TRAPPC2LH3BP13 241 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF749O43361 778 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC25A4P12235 298 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ABCD3P28288 659 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OPRM1P35372 400 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 THBS2P35442 1172 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PTGFRP43088 359 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 KIR3DL2P43630 455 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC25A1P53007 311 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SRSF3P84103 164 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 GGTLC2Q14390 218 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CATSPERDQ86XM0 798 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF100Q8IYN0 542 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 UBAC2Q8NBM4 344 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CLEC1AQ8NC01 280 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR13D1Q8NGV5 346 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC46A1Q96NT5 459 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR8B4Q96RC9 309 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RAB18Q9NP72 206 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC2A4RGQ9NR83 387 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC17A5Q9NRA2 495 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 KCNIP1Q9NZI2 227 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR5AC2Q9NZP5 309 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 AMDHD2Q9Y303 409 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 MRPS18BQ9Y676 258 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 A0A1W2PNR3 127 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 BTBD17A6NE02 478 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 FRG2CA6NGY1 282 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 C9J4A7 227 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LMX1BO60663 402 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CLDN1O95832 211 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TM4SF4P48230 202 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ATRAIDQ6UW56 229 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PARM1Q6UWI2 310 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CLEC18BQ6UXF7 455 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC25A42Q86VD7 318 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 THNSL2Q86YJ6 484 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 NOXO1Q8NFA2 376 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 DYRK2Q92630 601 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RAB39BQ96DA2 213 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PHYHIPLQ96FC7 376 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 C19orf43Q9BQ61 176 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PECRQ9BY49 303 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PLA2G2FQ9BZM2 168 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TXNIPQ9H3M7 391 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PATZ1Q9HBE1 687 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LHX9Q9NQ69 397 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC39A9Q9NUM3 307 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RASL12Q9NYN1 266 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 MIOXQ9UGB7 285 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 OR14J1Q9UGF5 321 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LINC01553A4QN01 128 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ANKRD30BLA7E2S9 258 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 NPIPB8E9PQR5 432 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 C17orf112F2Z3M2 114 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 AP4M1O00189 453 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CTSVO60911 334 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RECKO95980 971 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 F10P00742 488 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 NGFRP08138 427 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CELA2BP08218 269 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 MMP7P09237 267 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CISD3P0C7P0 127 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 CD37P11049 281 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 APLNRP35414 380 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ERVS71-1P61550 626 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 RPS16P62249 146 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM128Q5BJH2 165 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 GGNBP1Q5YKI7 109 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 FAM199XQ6PEV8 388 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.47□□□□□ -1.69
SYNE2-223ENST00000557005 SLC38A9Q8NBW4 561 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 LFNGQ8NES3 379 aa4.47□□□□□ -1.69
SYNE2-223ENST00000557005 PIK3IP1Q96FE7 263 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms