RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
NEK9-209ENST00000556170 CMTM3Q96MX0 182 aa13.2□□□□□ -0.3
NEK9-209ENST00000556170 GFI1Q99684 422 aa13.2□□□□□ -0.3
NEK9-209ENST00000556170 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
NEK9-209ENST00000556170 SZT2Q5T011 3432 aa13.2□□□□□ -0.3
NEK9-209ENST00000556170 COL4A3Q01955 1670 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 TRBV5-5A0A0J9YX44 114 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 RAMP1O60894 148 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 CFDP00746 253 aaPredicted RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 WIPI1Q5MNZ9 446 aaPredicted RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 BRICD5Q6PL45 260 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 MOB3CQ70IA8 216 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZNF100Q8IYN0 542 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 NUBPLQ8TB37 319 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 SLCO5A1Q9H2Y9 848 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 MEMO1Q9Y316 297 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZNF175Q9Y473 711 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 CACNA1DQ01668 2161 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 A0A096LPE4 126 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 A0A1W2PPZ6 126 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 SYNGR4O95473 234 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 RAG2P55895 527 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 HERV-K104P61576 105 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PCK2Q16822 640 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZNF585AQ6P3V2 769 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 GJE1A6NN92 205 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 WRBO00258 174 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 DHHO43323 396 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 EIF1BO60739 113 aaKnown RBP13.19□□□□□ -0.3
NEK9-209ENST00000556170 RD3LP0DJH9 198 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PNLIPP16233 465 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 CD96P40200 585 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 DHRS2Q13268 280 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PDSS1Q5T2R2 415 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZNF813Q6ZN06 617 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PAQR8Q8TEZ7 354 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PPP1R1CQ8WVI7 109 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 PIGQQ9BRB3 760 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 ZFP64Q9NPA5 681 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 NIT2Q9NQR4 276 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
NEK9-209ENST00000556170 OR2M5A3KFT3 312 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 ZNF205O95201 554 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 SUMO3P55854 103 aaPredicted RBP13.18□□□□□ -0.3
NEK9-209ENST00000556170 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 LAMTOR1Q6IAA8 161 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 VASH2Q86V25 355 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 KCNIP3Q9Y2W7 256 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 A0A1B0GTQ1 180 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 A6NJ64 397 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 HSPB2A8KAH6 182 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 ZNF705EA8MWA4 302 aaPredicted RBP13.18□□□□□ -0.3
NEK9-209ENST00000556170 MRPL33O75394 65 aaKnown RBP13.18□□□□□ -0.3
NEK9-209ENST00000556170 GLP1RP43220 463 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 HSPB2Q16082 182 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 EXOSC6Q5RKV6 272 aaKnown RBP13.18□□□□□ -0.3
NEK9-209ENST00000556170 DCAF12L2Q5VW00 463 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
NEK9-209ENST00000556170 DOK3Q7L591 496 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 NAA40Q86UY6 237 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 C20orf196Q8IYI0 205 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 OR8B12Q8NGG6 310 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 OR10R2Q8NGX6 335 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 FBXO24O75426 580 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 RAD51DO75771 328 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 SCGNO76038 276 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 ABHD16AO95870 558 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 GLAP06280 429 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 CYB561P49447 251 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 EXT1Q16394 746 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 STPG1Q5TH74 334 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
NEK9-209ENST00000556170 H3BMH7 237 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 SOCS1O15524 211 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 TTRP02766 147 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 FNDC7Q5VTL7 733 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 THOC3Q96J01 351 aaKnown RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 ZNF385AQ96PM9 386 aaKnown RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 SDHAF2Q9NX18 166 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 KRBOX1C9JBD0 128 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 SPRY1O43609 319 aaPredicted RBP13.17□□□□□ -0.3
NEK9-209ENST00000556170 IFI6P09912 130 aa13.17□□□□□ -0.3
NEK9-209ENST00000556170 PLP2Q04941 152 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms