RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CXorf56Q9H5V9 222 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 ISYNA1Q9NPH2 558 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 ACOT13Q9NPJ3 140 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 ZDHHC8Q9ULC8 765 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 SIRT4Q9Y6E7 314 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-219ENST00000555323 V9GYS6 101 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 DSCAMO60469 2012 aa10.82□□□□□ -0.68
SYNE2-219ENST00000555323 HRNRQ86YZ3 2850 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-219ENST00000555323 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 A0A1W2PPW3 197 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 PLSCR5A0PG75 271 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 LILRA1O75019 489 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 TNFAIP8O95379 198 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF12P17014 697 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 PCMT1P22061 227 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ACKR3P25106 362 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ALDH3B1P43353 468 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 MAP2K3P46734 347 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 GPR50Q13585 617 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 NKPD1Q17RQ9 610 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ZMAT1Q5H9K5 638 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF773Q6PK81 442 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 Q6ZR03 302 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 RDH10Q8IZV5 341 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 OR56B2PQ8NGI1 322 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 C10orf35Q96D05 121 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 SMIM19Q96E16 107 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-219ENST00000555323 DIRC2Q96SL1 478 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 CACNG6Q9BXT2 260 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF696Q9H7X3 374 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 TMEM100Q9NV29 134 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 BEX4Q9NWD9 120 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-219ENST00000555323 GTF2A1LQ9UNN4 478 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 PLEKHA6Q9Y2H5 1048 aa10.81□□□□□ -0.68
SYNE2-219ENST00000555323 ASH1LQ9NR48 2969 aaKnown RBP10.8□□□□□ -0.68
SYNE2-219ENST00000555323 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 P2RY10O00398 339 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 SYT7O43581 403 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 CST4P01036 141 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 CD55P08174 381 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 NAT2P11245 290 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 ACHEP22303 614 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 DNASE1P24855 282 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF81P51508 661 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 PRSS12P56730 875 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 RIPPLY1Q0D2K3 151 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 TPBGQ13641 420 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 MED22Q15528 200 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 GFOD2Q3B7J2 385 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 FAM209AQ5JX71 171 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 TMEM42Q69YG0 159 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 LRRC75A-AS1Q8N1F1 130 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 FTMTQ8N4E7 242 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 SVOPQ8N4V2 548 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 SEMA6DQ8NFY4 1073 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 OR5AK2Q8NH90 309 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 NEU4Q8WWR8 484 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-219ENST00000555323 PGLYRP3Q96LB9 341 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 PDCD1LG2Q9BQ51 273 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 COMMD4Q9H0A8 199 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 RAB1BQ9H0U4 201 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 MSL2Q9HCI7 577 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 HHLA2Q9UM44 414 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 SPG11Q96JI7 2443 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 UNC79Q9P2D8 2635 aa10.8□□□□□ -0.68
SYNE2-219ENST00000555323 AKAP6Q13023 2319 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 A0A1B0GVI7 797 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 ZSCAN5BA6NJL1 495 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 TRIM64CA6NLI5 447 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 GMDSO60547 372 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 CDKN1AP38936 164 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 MAP2K4P45985 399 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 CDH15P55291 814 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 MLLT11Q13015 90 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-219ENST00000555323 DEFB113Q30KQ7 82 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 PCGF3Q3KNV8 242 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 UBE2UQ5VVX9 321 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 OR5AS1Q8N127 324 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 ZCCHC24Q8N2G6 241 aaKnown RBP10.79□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF676Q8N7Q3 588 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 SPERTQ8NA61 448 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 GHSRQ92847 366 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 TRMT61AQ96FX7 289 aaKnown RBP10.79□□□□□ -0.68
SYNE2-219ENST00000555323 FAM71F1Q96KD3 344 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-219ENST00000555323 MGLLQ99685 303 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 DYNLRB1Q9NP97 96 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF281Q9Y2X9 895 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 NOP16Q9Y3C1 178 aaKnown RBP10.79□□□□□ -0.68
SYNE2-219ENST00000555323 RHBDD3Q9Y3P4 386 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 MPC1Q9Y5U8 109 aa10.79□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF816-ZNF321PA0A0X1KG74 233 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 LOC107986453A0A1B0GWG9 222 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 ANKRD30BLA7E2S9 258 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 MLNRO43193 412 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms