RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	COL8A2	P25067	703 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	GGT2	P36268	569 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MPV17	P39210	176 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	WNT5A	P41221	380 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	NAA10	P41227	235 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	COMP	P49747	757 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ENTPD1	P49961	510 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF81	P51508	661 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MECP2	P51608	486 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF133	P52736	654 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	KRTAP10-11	P60412	298 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ACTR3	P61158	418 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	CDK5	Q00535	292 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MALL	Q13021	153 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	LRRC36	Q1X8D7	754 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLC18B1	Q6NT16	456 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZFP1	Q6P2D0	407 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	CFAP77	Q6ZQR2	320 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZBTB49	Q6ZSB9	765 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	DPY19L4	Q7Z388	723 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	KRT77	Q7Z794	578 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	DTX2	Q86UW9	622 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZBTB46	Q86UZ6	589 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF101	Q8IZC7	436 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	RFLNB	Q8N5W9	214 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	BOLL	Q8N9W6	283 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	BHLHE23	Q8NDY6	225 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	NUP37	Q8NFH4	326 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	BBS1	Q8NFJ9	593 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLC26A10	Q8NG04	563 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR2Z1	Q8NG97	314 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	KLF14	Q8TD94	323 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	IGFBPL1	Q8WX77	278 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	GTF3A	Q92664	365 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	PTP4A1	Q93096	173 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	EME1	Q96AY2	570 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLAMF6	Q96DU3	332 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF75A	Q96N20	296 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	DCLRE1C	Q96SD1	692 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	INTS14	Q96SY0	518 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MYCBP	Q99417	103 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ATF6B	Q99941	703 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	COPS4	Q9BT78	406 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	WAC	Q9BTA9	647 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	HCAR1	Q9BXC0	346 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	TTTY10	Q9BZA0	68 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	PRRG3	Q9BZD7	231 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	POFUT1	Q9H488	388 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF442	Q9H7R0	627 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MSL2	Q9HCI7	577 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	S100A14	Q9HCY8	104 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	HINT3	Q9NQE9	182 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MRPL22	Q9NWU5	206 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	IMPAD1	Q9NX62	359 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLCO1C1	Q9NYB5	712 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	MYEF2	Q9P2K5	600 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	LAMP5	Q9UJQ1	280 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	LHFPL6	Q9Y693	200 aa		3.96	□□□□□ -1.78
ATXN3-231	ENST00000554994	CMYA5	Q8N3K9	4069 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	KIAA2026	Q5HYC2	2103 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994		A0A096LNT2	108 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ISPD	A4D126	451 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ARRDC5	A6NEK1	342 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SURF4	O15260	269 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	PRKY	O43930	277 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SBK2	P0C263	348 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	IGHV4-31	P0DP07	118 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLC2A1	P11166	492 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	PAX1	P15863	534 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	HNF1A	P20823	631 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	TNFSF4	P23510	183 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZFP36	P26651	326 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	POLR2I	P36954	125 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	MAGEB1	P43366	347 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLC15A1	P46059	708 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	BLVRA	P53004	296 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SLC25A1	P53007	311 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	RAD23A	P54725	363 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	DSCR9	P59020	149 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ESRRG	P62508	458 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	TNFAIP6	P98066	277 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ECH1	Q13011	328 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	PSG7	Q13046	419 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	EFNB3	Q15768	340 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SNCB	Q16143	134 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	TIGD6	Q17RP2	521 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	AWAT1	Q58HT5	328 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	ZNF362	Q5T0B9	420 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	LCN1P1	Q5VSP4	162 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	OR2T2	Q6IF00	324 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	C11orf71	Q6IPW1	123 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	FAHD1	Q6P587	224 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	FOXL2NB	Q6ZUU3	175 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	RFPL4B	Q6ZWI9	263 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	FAM57B	Q71RH2	274 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	MEPCE	Q7L2J0	689 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	SHF	Q7M4L6	423 aa		3.95	□□□□□ -1.78
ATXN3-231	ENST00000554994	MRPL21	Q7Z2W9	205 aa	Known RBP	3.95	□□□□□ -1.78

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