RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 NPDC1Q9NQX5 325 aaPredicted RBP12.38□□□□□ -0.43
SHOX2-206ENST00000554685 KLF2Q9Y5W3 355 aaPredicted RBP12.38□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF816-ZNF321PA0A0X1KG74 233 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 MEGF11A6BM72 1044 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 DPRXA6NFQ7 191 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 WIPF3A6NGB9 483 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 TRIM64BA6NI03 449 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 H3BSH0 61 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 ABCD4O14678 606 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 PIN1P1O15428 100 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 CDRT1O95170 752 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 CD3EP07766 207 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 ERCC1P07992 297 aaPredicted RBP12.37□□□□□ -0.43
SHOX2-206ENST00000554685 SRMP19623 302 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 ANOS1P23352 680 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 RANBP1P43487 201 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 KIR2DL3P43628 341 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 SELENOVP59797 346 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 BSPH1Q075Z2 132 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 FAM27D1Q5T7N8 215 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 UTS2BQ765I0 119 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 SLC25A40Q8TBP6 338 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 FAM222BQ8WU58 562 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 TECTBQ96PL2 329 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 ZCCHC4Q9H5U6 513 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 ABCB9Q9NP78 766 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 KCNN3Q9UGI6 736 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 NBASA2RRP1 2371 aa12.37□□□□□ -0.43
SHOX2-206ENST00000554685 A0A1W2PPK0 400 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 ANKRD30BLA7E2S9 258 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 CD300LBA8K4G0 201 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 ATP6V1G2-DDX39BF2Z307 99 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 ALX3O95076 343 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 RAB3AP20336 220 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 RAB3BP20337 219 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 SOX6P35712 828 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 NKX6-1P78426 367 aaPredicted RBP12.36□□□□□ -0.43
SHOX2-206ENST00000554685 SPCS2Q15005 226 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 MBNL2Q5VZF2 373 aaKnown RBP12.36□□□□□ -0.43
SHOX2-206ENST00000554685 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 NKAIN3Q8N8D7 197 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 NDNFQ8TB73 568 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 PIGTQ969N2 578 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 HAVCR1Q96D42 359 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 CMBLQ96DG6 245 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 ADAT3Q96EY9 351 aaPredicted RBP12.36□□□□□ -0.43
SHOX2-206ENST00000554685 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 MARS2Q96GW9 593 aaKnown RBP12.36□□□□□ -0.43
SHOX2-206ENST00000554685 SOX7Q9BT81 388 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 CHST5Q9GZS9 411 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 RNF167Q9H6Y7 350 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 TAS2R4Q9NYW5 299 aa12.36□□□□□ -0.43
SHOX2-206ENST00000554685 NOP16Q9Y3C1 178 aaKnown RBP12.36□□□□□ -0.43
SHOX2-206ENST00000554685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 A0A1W2PPW3 197 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 ANKRD61A6NGH8 418 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 J3QKU1 62 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 MAGEB3O15480 346 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 TMEM127O75204 238 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 GOSR1O95249 250 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 OCMP0CE72 109 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 FAHP16930 419 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 IGFBP3P17936 291 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 ACKR3P25106 362 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 SDC2P34741 201 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 MAGEB1P43366 347 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 HLXQ14774 488 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 MOGQ16653 247 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 SPATA46Q5T0L3 261 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 KRT74Q7RTS7 529 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 OR1M1Q8NGA1 313 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 OR56B2PQ8NGI1 322 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 KLF14Q8TD94 323 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 CPNE2Q96FN4 548 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 PPIL3Q9H2H8 161 aaKnown RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 POFUT1Q9H488 388 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF442Q9H7R0 627 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 TMEM138Q9NPI0 162 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
SHOX2-206ENST00000554685 POU2F3Q9UKI9 436 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 CMAHPQ9Y471 501 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 ATP23Q9Y6H3 246 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 FAM208BQ5VWN6 2430 aa12.35□□□□□ -0.43
SHOX2-206ENST00000554685 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 SULT1B1O43704 296 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 LMX1BO60663 402 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 CST4P01036 141 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 NRASP01111 189 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 ZNF250P15622 560 aa12.34□□□□□ -0.43
SHOX2-206ENST00000554685 KITLGP21583 273 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms