RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HDDC2Q7Z4H3 204 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 OTOSQ8NHW6 89 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-214ENST00000554604 DIRAS2Q96HU8 199 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 VRK1Q99986 396 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-214ENST00000554604 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
SHMT2-214ENST00000554604 ZCCHC4Q9H5U6 513 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 SEC61A2Q9H9S3 476 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 MRM2Q9UI43 246 aaKnown RBP10.73□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF281Q9Y2X9 895 aa10.73□□□□□ -0.69
SHMT2-214ENST00000554604 IGHV2OR16-5A0A0B4J2B6 119 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 A0A0G2JK05 382 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF503-AS2A6NEH8 195 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 FABP12A6NFH5 140 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF879B4DU55 563 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 B9A039 149 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 SLC16A7O60669 478 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 NCR1O76036 304 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 FARS2O95363 451 aaKnown RBP10.72□□□□□ -0.69
SHMT2-214ENST00000554604 IGHG1P01857 330 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 OR8G3PP0DMU2 310 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 RAB3BP20337 219 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 PSMB10P40306 273 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 EVX1P49640 407 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 PSMD7P51665 324 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 HGFACQ04756 655 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ALKBH1Q13686 389 aaKnown RBP10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ADIPOQQ15848 244 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 SWI5Q1ZZU3 235 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 KRTAP21-3Q3LHN1 58 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 LIPNQ5VXI9 398 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 SFXN4Q6P4A7 337 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 FDX2Q6P4F2 183 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 DNM1P46Q6ZS02 220 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF627Q7L945 461 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 MYPOPQ86VE0 399 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-214ENST00000554604 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF525Q8N782 197 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 YIPF7Q8N8F6 280 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 POC5Q8NA72 575 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 NUP37Q8NFH4 326 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 FAM168AQ92567 244 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 OR8B4Q96RC9 309 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 B3GNT2Q9NY97 397 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 SPEF1Q9Y4P9 236 aa10.72□□□□□ -0.69
SHMT2-214ENST00000554604 IGHV4-30-2A0A087WSY4 118 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF593O00488 134 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 DHHO43323 396 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 HPGDSO60760 199 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 KHDRBS3O75525 346 aaKnown RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 UBL3O95164 117 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 F12P00748 615 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 QDPRP09417 244 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 CSF3P09919 207 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 PGA4P0DJD7 388 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 PGA3P0DJD8 388 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 CTLA4P16410 223 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 NPR2P20594 1047 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 THBS2P35442 1172 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 THBS4P35443 961 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF84P51523 738 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 NANOS3P60323 173 aaKnown RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 RAB1AP62820 205 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ROM1Q03395 351 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 GLO1Q04760 184 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 SNTB2Q13425 540 aaKnown RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 MST1LQ2TV78 715 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 HSD17B12Q53GQ0 312 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 TEX30Q5JUR7 227 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 IDNKQ5T6J7 187 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 SLC18B1Q6NT16 456 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 LRFN4Q6PJG9 635 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF554Q86TJ5 538 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 OR8H2Q8N162 312 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 OR13C5Q8NGS8 318 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 THEM6Q8WUY1 208 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 THRSPQ92748 146 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 MAP6Q96JE9 813 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 PPP1R3EQ9H7J1 279 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ZNF442Q9H7R0 627 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ETAA1Q9NY74 926 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 ABRACLQ9P1F3 81 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 FBXO9Q9UK97 447 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-214ENST00000554604 IKZF2Q9UKS7 526 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 FBXL3Q9UKT7 428 aa10.71□□□□□ -0.69
SHMT2-214ENST00000554604 MALRD1Q5VYJ5 2156 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms