RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CXCL13O43927 109 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 EIF1BO60739 113 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 NTF4P34130 210 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 B3GALT5-AS1P59052 145 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 H3F3AP84243 136 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 COMMD2Q86X83 199 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 DND1Q8IYX4 353 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 OR6X1Q8NH79 312 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 SFT2D1Q8WV19 159 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 PIGQQ9BRB3 760 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 RBM24Q9BX46 236 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 ATMQ13315 3056 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 SVILO95425 2214 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 RP1L1Q8IWN7 2480 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 C5orf63A6NC05 138 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 SRSF10O75494 262 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 SNAPINO95295 136 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 CDK2P24941 298 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 MMP15P51511 669 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 TAF13Q15543 124 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 DCAF10Q5QP82 559 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 OR9K2Q8NGE7 335 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF845Q96IR2 970 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-212ENST00000554467 CDC6Q99741 560 aa10.32□□□□□ -0.76
SHMT2-212ENST00000554467 RP2O75695 350 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 OR2A4O95047 310 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 SELLP14151 372 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 CSNK1A1P48729 337 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 MICBQ29980 383 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 NAA40Q86UY6 237 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 VASH2Q86V25 355 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 PUSL1Q8N0Z8 303 aaKnown RBP10.31□□□□□ -0.76
SHMT2-212ENST00000554467 BOLLQ8N9W6 283 aaKnown RBP10.31□□□□□ -0.76
SHMT2-212ENST00000554467 OR52B4Q8NGK2 314 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 OR2AJ1Q8NGZ0 328 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 PHYHIPQ92561 330 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 C1orf198Q9H425 327 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 KLHL9Q9P2J3 617 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 NPIPB13A6NJU9 1138 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 NPIPB4C9JG80 1138 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 AQP8O94778 261 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 PMS2P2O95744 297 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 IGHV3-9P01782 118 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 RAC1P63000 192 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 GK2Q14410 553 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-212ENST00000554467 ABHD17BQ5VST6 288 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 SLC25A47Q6Q0C1 308 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 DMBX1Q8NFW5 382 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 FCAMRQ8WWV6 532 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 FGGYQ96C11 551 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 TMEM41AQ96HV5 264 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 SPACA5Q96QH8 159 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 GINS4Q9BRT9 223 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 TMPRSS13Q9BYE2 586 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 ARL6Q9H0F7 186 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 BIN3Q9NQY0 253 aa10.31□□□□□ -0.76
SHMT2-212ENST00000554467 SGCEO43556 437 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 NEURL1O76050 574 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 SPDEFO95238 335 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 HSD11B1P28845 292 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GNALP38405 381 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CCR9P51686 369 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CLDN15P56746 228 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 H2BFSP57053 126 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CSRP2Q16527 193 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 PCK2Q16822 640 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 H3F3CQ6NXT2 135 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 FDX2Q6P4F2 183 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 BIVMQ86UB2 503 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 JAGN1Q8N5M9 183 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 OR51E1Q8TCB6 317 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 S100A16Q96FQ6 103 aaKnown RBP10.3□□□□□ -0.76
SHMT2-212ENST00000554467 TMEM138Q9NPI0 162 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ZNHIT1O43257 154 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 PRSS12P56730 875 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CARD18P57730 90 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GLYATL3Q5SZD4 288 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 KLHL24Q6TFL4 600 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 RNF144BQ7Z419 303 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GGNQ86UU5 652 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ZIC4Q8N9L1 334 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ADPRHL1Q8NDY3 354 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GLYATL2Q8WU03 294 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 PBOV1Q9GZY1 135 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 HRASLSQ9HDD0 168 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 FAM206AQ9NX38 181 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF319Q9P2F9 582 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CAMK2AQ9UQM7 478 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 SLC5A6Q9Y289 635 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 MYO7BQ6PIF6 2116 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 OR5H15A6NDH6 313 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 KRT33AO76009 404 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms