RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 UBTFL6P0CB48 400 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 STAG3L2P0CL84 134 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ADRB3P13945 408 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF43P17038 809 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 NPR2P20594 1047 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CSRP1P21291 193 aaKnown RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 DCKP27707 260 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 HOXA6P31267 233 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 SLC1A2P43004 574 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OR1G1P47890 313 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 DLX1P56177 255 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CLDN8P56748 225 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 GPX6P59796 221 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 PRPS1P60891 318 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 STXBP1P61764 594 aaKnown RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ACVR1Q04771 509 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 RAD51Q06609 339 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 SPAG1Q07617 926 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 IFT88Q13099 833 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 HIKESHIQ53FT3 197 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 FAM78AQ5JUQ0 283 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CCNJQ5T5M9 372 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 MLIPQ5VWP3 458 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OR52W1Q6IF63 320 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ULK3Q6PHR2 472 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 SPESP1Q6UW49 350 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF620Q6ZNG0 422 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 SLC25A48Q6ZT89 311 aaKnown RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 H2AFVQ71UI9 128 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 FAM220AQ7Z4H9 259 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 LHFPL3Q86UP9 236 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF547Q8IVP9 402 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CMTM1Q8IZ96 169 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 KIR2DL5AQ8N109 375 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 PROKR2Q8NFJ6 384 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OR51G1Q8NGK1 321 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OR1S2Q8NGQ3 325 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CA5BP1Q8WTZ4 195 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 GEMIN6Q8WXD5 167 aaKnown RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ACOT11Q8WXI4 607 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 NRGNQ92686 78 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 KIAA1143Q96AT1 154 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 LRRC39Q96DD0 335 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 PIK3IP1Q96FE7 263 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 MBOAT7Q96N66 472 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM175Q9BSA9 504 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 RNF126Q9BV68 326 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 OSBPL10Q9BXB5 764 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 HAUS4Q9H6D7 363 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 UGT1A10Q9HAW8 530 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CYP3A43Q9HB55 503 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 FGF20Q9NP95 211 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 DMAP1Q9NPF5 467 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM9BQ9NQ34 198 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF302Q9NR11 478 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 QPCTLQ9NXS2 382 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 CALYQ9NYX4 217 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 AHSPQ9NZD4 102 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 STOX2Q9P2F5 926 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 PEF1Q9UBV8 284 aaKnown RBP2.17□□□□□ -2.06
SCFD1-210ENST00000553693 KIF25Q9UIL4 384 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 DDX19BQ9UMR2 479 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 FLVCR2Q9UPI3 526 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 COL1A2P08123 1366 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 LAMA5O15230 3695 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 HECTD1Q9ULT8 2610 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 DOCK6Q96HP0 2047 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 NFASCO94856 1347 aa2.17□□□□□ -2.06
SCFD1-210ENST00000553693 TRBV9A0A0B4J1U6 114 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 A0A0G2JRQ6 117 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 TMEM150BA6NC51 233 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ARL5CA6NH57 179 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 F6UB75 175 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF701M0R085 212 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 XKRYO14609 159 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 AIREO43918 545 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 IGHV2-5P01817 119 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 HLA-HP01893 362 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 SERPINA5P05154 406 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 KRT16P08779 473 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 CSF3P09919 207 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 GKN3PP0CG01 181 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ICAM2P13598 275 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 PTNP21246 168 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 HOXA9P31269 272 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 BMI1P35226 326 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 CCR2P41597 374 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 CDKN1BP46527 198 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 RPS5P46782 204 aaKnown RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ETV1P50549 477 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 RORCP51449 518 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 DAOAP59103 153 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 RPS14P62263 151 aaKnown RBP2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF92Q03936 586 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF33AQ06730 810 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 SELENBP1Q13228 472 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 MAB21L1Q13394 359 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 GGTLC2Q14390 218 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 PON2Q15165 354 aa2.16□□□□□ -2.06
SCFD1-210ENST00000553693 SOHLH1Q5JUK2 328 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms