RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 C9orf62Q8N4C0 152 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 SPICQ8N5J4 248 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 MEIOBQ8N635 442 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 OR10R2Q8NGX6 335 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 OR1F12Q8NHA8 337 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 FOXB1Q99853 325 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 TTTY12Q9BZ98 90 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 GPR35Q9HC97 309 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF69Q9UC07 566 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 SCP2D1Q9UJQ7 156 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 HSPB11Q9Y547 144 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 MED13Q9UHV7 2174 aa12.28□□□□□ -0.44
RAB3IP-216ENST00000552199 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 ALX3O95076 343 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 CHRM2P08172 466 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 CLDN18P56856 261 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 SCRN3Q0VDG4 424 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 NLRC3Q7RTR2 1065 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 GALNT16Q8N428 558 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 OR52H1Q8NGJ2 320 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 KCNG3Q8TAE7 436 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF431Q8TF32 576 aaPredicted RBP12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 PP6455Q8WZ26 134 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 SGK3Q96BR1 496 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 C10orf35Q96D05 121 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 GPER1Q99527 375 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 LPAR5Q9H1C0 372 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 MGAT4AQ9UM21 535 aa12.27□□□□□ -0.44
RAB3IP-216ENST00000552199 ZNF736B4DX44 427 aaPredicted RBP12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 M0QYG6 137 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 CDC14BO60729 498 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 MTRF1O75570 445 aaKnown RBP12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 RLN1P04808 185 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 SP1P08047 785 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF735P0CB33 412 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 UBBP0CG47 229 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 B4GALT1P15291 398 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF32P17041 273 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 MAGEA5P43359 124 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 SNRPD2P62316 118 aaKnown RBP12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 PLGLB1Q02325 96 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 SRYQ05066 204 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 TRAPPC6BQ86SZ2 158 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 TMEM104Q8NE00 496 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 OR11H4Q8NGC9 324 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC6A15Q9H2J7 730 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 PARD6AQ9NPB6 346 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF224Q9NZL3 707 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 MGAT4CQ9UBM8 478 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 PIGLQ9Y2B2 252 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 TIMM10BQ9Y5J6 103 aa12.27□□□□□ -0.45
RAB3IP-216ENST00000552199 A0A0A6YYD4 124 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 OR6C6A6NF89 314 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF780AO75290 641 aaPredicted RBP12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 MPIG6BO95866 241 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 ITGB2P05107 769 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 FAHP16930 419 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 ZNF708P17019 499 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 KISS1Q15726 138 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 UBE2V2Q15819 145 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 OR52B4Q8NGK2 314 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 NICN1Q9BSH3 213 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 SELENOIQ9C0D9 397 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 UPB1Q9UBR1 384 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 NOSIPQ9Y314 301 aaKnown RBP12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 RTTNQ86VV8 2226 aa12.26□□□□□ -0.45
RAB3IP-216ENST00000552199 CDK2AP1O14519 115 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 NME2P1O60361 137 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 AMY2AP04746 511 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 PATE4P0C8F1 98 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 GNB3P16520 340 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 NME2P22392 152 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 PCBD1P61457 104 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 PSG4Q00888 419 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 RSPO4Q2I0M5 234 aaPredicted RBP12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 SFRP5Q5T4F7 317 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 CHMP1BQ7LBR1 199 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 GALNTL5Q7Z4T8 443 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 PNLDC1Q8NA58 520 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 AKR7LQ8NHP1 331 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 FGFBP3Q8TAT2 258 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2H1Q9GZK4 316 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 CHST5Q9GZS9 411 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 WNT5BQ9H1J7 359 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 BANF2Q9H503 90 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms