RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 CCDC32Q9BV29 185 aa12.33□□□□□ -0.44
LETMD1-229ENST00000551261 COMMD3Q9UBI1 195 aa12.33□□□□□ -0.44
LETMD1-229ENST00000551261 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
LETMD1-229ENST00000551261 N6AMT1Q9Y5N5 214 aa12.33□□□□□ -0.44
LETMD1-229ENST00000551261 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 CTDSP2O14595 271 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 SCGNO76038 276 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 BMP4P12644 408 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 SELEP16581 610 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 PRKACBP22694 351 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 HTR2CP28335 458 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 CHRNB4P30926 498 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 TNFSF8P32971 234 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 CAV3P56539 151 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 CLVS2Q5SYC1 327 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 TMEM42Q69YG0 159 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 C3P1Q6ZMU1 363 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 LAX1Q8IWV1 398 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 DNAAF1Q8NEP3 725 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 OR13C9Q8NGT0 318 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 PIGTQ969N2 578 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 DIRAS2Q96HU8 199 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 REPIN1Q9BWE0 567 aaKnown RBP12.32□□□□□ -0.44
LETMD1-229ENST00000551261 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 KCNN3Q9UGI6 736 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 PIGLQ9Y2B2 252 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 SLC25A15Q9Y619 301 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 SPTA1P02549 2419 aa12.32□□□□□ -0.44
LETMD1-229ENST00000551261 BSNQ9UPA5 3926 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 SVILO95425 2214 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 INTS1Q8N201 2190 aaKnown RBP12.31□□□□□ -0.44
LETMD1-229ENST00000551261 A0A1B0GUH1 482 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 C16orf97H3BN30 126 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 PRF1P14222 555 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 CCNOP22674 350 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 RAD52P43351 418 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 MAGEB1P43366 347 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 GSK3AP49840 483 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 ASCL1P50553 236 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
LETMD1-229ENST00000551261 FAM3AP98173 230 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 LY6DQ14210 128 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 FBXL19-AS1Q494R0 122 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 FAM166AQ6J272 317 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 XKRXQ6PP77 449 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 FBXW12Q6X9E4 464 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 NAA40Q86UY6 237 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 SAMD12Q8N8I0 201 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 GFI1Q99684 422 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 ABCG5Q9H222 651 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 CYSLTR2Q9NS75 346 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 FBLN5Q9UBX5 448 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 NOP16Q9Y3C1 178 aaKnown RBP12.31□□□□□ -0.44
LETMD1-229ENST00000551261 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
LETMD1-229ENST00000551261 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
LETMD1-229ENST00000551261 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 LOC100289279A0A1B0GTE1 492 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 A6NJ64 397 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-229ENST00000551261 SMPD2O60906 423 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 BPNT1O95861 308 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ZNF93P35789 620 aaPredicted RBP12.3□□□□□ -0.44
LETMD1-229ENST00000551261 EVX1P49640 407 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 PITPNAQ00169 270 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ZNF92Q03936 586 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 PPA1Q15181 289 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ZNF181Q2M3W8 571 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 C16orf87Q6PH81 154 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 PCSK4Q6UW60 755 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 LHFPL2Q6ZUX7 228 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 LYPD6Q86Y78 171 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 JAGN1Q8N5M9 183 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 GDPD1Q8N9F7 314 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 S100PBPQ96BU1 408 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ACTR6Q9GZN1 396 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 MIXL1Q9H2W2 232 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 PIEZO2Q9H5I5 2752 aa12.3□□□□□ -0.44
LETMD1-229ENST00000551261 ISPDA4D126 451 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 FABP12A6NFH5 140 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 FAM25AB3EWG3 89 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 FAM25CB3EWG5 89 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 FAM25GB3EWG6 89 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 HPGDSO60760 199 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 CST4P01036 141 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 HCKP08631 526 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 SLC2A2P11168 524 aaPredicted RBP12.29□□□□□ -0.44
LETMD1-229ENST00000551261 RAC2P15153 192 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 FAHP16930 419 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 RAB6AP20340 208 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 MNDAP41218 407 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 WNT5AP41221 380 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 ALDH3B1P43353 468 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 RPS23P62266 143 aaKnown RBP12.29□□□□□ -0.44
LETMD1-229ENST00000551261 MRPS10P82664 201 aaKnown RBP12.29□□□□□ -0.44
LETMD1-229ENST00000551261 SPOCK1Q08629 439 aa12.29□□□□□ -0.44
LETMD1-229ENST00000551261 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms