RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 KCTD7Q96MP8 289 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 OPA3Q9H6K4 179 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
CACNB3-216ENST00000550391 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 DHDHQ9UQ10 334 aa12.17□□□□□ -0.46
CACNB3-216ENST00000550391 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 TRBV5-7A0A0A0MS05 114 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 LOC390937A0A1W2PQ73 354 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 SMPD2O60906 423 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 ARL6IP5O75915 188 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 UCHL1P09936 223 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 FAM157BP0CG42 384 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 EPXP11678 715 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 HOXB4P17483 251 aaPredicted RBP12.16□□□□□ -0.46
CACNB3-216ENST00000550391 TUBG1P23258 451 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 PTAFRP25105 342 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 PEX19P40855 299 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 MAGEB1P43366 347 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 VBP1P61758 197 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 PPP1CBP62140 327 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF92Q03936 586 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 SNTB1Q13884 538 aaKnown RBP12.16□□□□□ -0.46
CACNB3-216ENST00000550391 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 KBTBD8Q8NFY9 601 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 OR14K1Q8NGZ2 314 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 DACH2Q96NX9 599 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 SOX7Q9BT81 388 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 REPIN1Q9BWE0 567 aaKnown RBP12.16□□□□□ -0.46
CACNB3-216ENST00000550391 RNF167Q9H6Y7 350 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 NOX4Q9NPH5 578 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 ZNF275Q9NSD4 429 aaPredicted RBP12.16□□□□□ -0.46
CACNB3-216ENST00000550391 SPEF1Q9Y4P9 236 aa12.16□□□□□ -0.46
CACNB3-216ENST00000550391 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
CACNB3-216ENST00000550391 A0A1W2PPK0 400 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 DPRXA6NFQ7 191 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 DHRS7CA6NNS2 312 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 DHRS3O75911 302 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 MYL9P24844 172 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 CALRP27797 417 aaKnown RBP12.15□□□□□ -0.46
CACNB3-216ENST00000550391 MAP2K3P46734 347 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 GSK3AP49840 483 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 FAM3AP98173 230 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 HSD17B12Q53GQ0 312 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 FAM27D1Q5T7N8 215 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
CACNB3-216ENST00000550391 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
CACNB3-216ENST00000550391 OR1J1Q8NGS3 322 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 TMEM106AQ96A25 262 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 FGGYQ96C11 551 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 BCL2L14Q9BZR8 327 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 PPIL3Q9H2H8 161 aaKnown RBP12.15□□□□□ -0.46
CACNB3-216ENST00000550391 OR51B6Q9H340 312 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 PTTG3PQ9NZH4 202 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 V9GYS6 101 aa12.15□□□□□ -0.46
CACNB3-216ENST00000550391 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 CASKO14936 926 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 PIN1P1O15428 100 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 LMX1BO60663 402 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 ZNF20P17024 532 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 TGFBR1P36897 503 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 SERPINB10P48595 397 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-216ENST00000550391 TESK1Q15569 626 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 OR8B8Q15620 311 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 FBXW12Q6X9E4 464 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 USP43Q70EL4 1123 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 PGAP1Q75T13 922 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 SERPINA12Q8IW75 414 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 SLITRK2Q9H156 845 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 ESRP2Q9H6T0 727 aaKnown RBP12.14□□□□□ -0.47
CACNB3-216ENST00000550391 CKLFQ9UBR5 152 aa12.14□□□□□ -0.47
CACNB3-216ENST00000550391 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 GGT3PA6NGU5 568 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 TRIM64BA6NI03 449 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 CDRT1O95170 752 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 SRMP19623 302 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 MTNR1BP49286 362 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 BSPH1Q075Z2 132 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 SPOCK1Q08629 439 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 RIPPLY1Q0D2K3 151 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 TNK1Q13470 666 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 HLXQ14774 488 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-216ENST00000550391 SPCS2Q15005 226 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 NDNFQ8TB73 568 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 RADILQ96JH8 1075 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 OR2J1Q9GZK6 312 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
CACNB3-216ENST00000550391 PLEKHA1Q9HB21 404 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms