RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
TROAP-211ENST00000549891 TSPAN31Q12999 210 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 PCK2Q16822 640 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 DPY19L4Q7Z388 723 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 ZDHHC21Q8IVQ6 265 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 GALNT4Q8N4A0 578 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 FAM86B1Q8N7N1 296 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 OR5R1Q8NH85 324 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 GNPDA2Q8TDQ7 276 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 LRRC29Q8WV35 223 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 C12orf43Q96C57 262 aaKnown RBP11.18□□□□□ -0.62
TROAP-211ENST00000549891 CMTM5Q96DZ9 223 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 PYURFQ96I23 114 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 KCNJ15Q99712 375 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 GORASP2Q9H8Y8 452 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 SP140LQ9H930 580 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 ADA2Q9NZK5 511 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 ZNRD1Q9P1U0 126 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 CD300AQ9UGN4 299 aa11.18□□□□□ -0.62
TROAP-211ENST00000549891 IGHV3OR15-7A0A075B7D8 119 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 TVP23AA6NH52 213 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 ZNF878C9JN71 531 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 NDUFB3O43676 98 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 TSPAN9O75954 239 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 TSPAN15O95858 294 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 PAHP00439 452 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 PYCR1P32322 319 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 RPS27P42677 84 aaKnown RBP11.17□□□□□ -0.62
TROAP-211ENST00000549891 PRKXP51817 358 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 POU4F2Q12837 409 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 LRRC10Q5BKY1 277 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 WDR38Q5JTN6 314 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 FAM110DQ8TAY7 271 aaPredicted RBP11.17□□□□□ -0.62
TROAP-211ENST00000549891 SPSB4Q96A44 273 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 SLAMF6Q96DU3 332 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 CCL13Q99616 98 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 CCDC134Q9H6E4 229 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 CENPMQ9NSP4 180 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 PRPF19Q9UMS4 504 aaKnown RBP11.17□□□□□ -0.62
TROAP-211ENST00000549891 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 COMMD3-BMI1R4GMX3 469 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 V9GYQ6 96 aa11.17□□□□□ -0.62
TROAP-211ENST00000549891 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 ANKRD61A6NGH8 418 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 TBX1O43435 398 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 FCN3O75636 299 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 SASH3O75995 380 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 APOC1P02654 83 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 SEMG1P04279 462 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 FABP3P05413 133 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 SPARCP09486 303 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 CSF1P09603 554 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 SLC2A1P11166 492 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 H2AFXP16104 143 aaPredicted RBP11.16□□□□□ -0.62
TROAP-211ENST00000549891 CFL1P23528 166 aaKnown RBP11.16□□□□□ -0.62
TROAP-211ENST00000549891 RRM2P31350 389 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 FMO3P31513 532 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 GNALP38405 381 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 ENTPD1P49961 510 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 GRB2P62993 217 aaKnown RBP11.16□□□□□ -0.62
TROAP-211ENST00000549891 SNCBQ16143 134 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 TIGD6Q17RP2 521 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 C1QL4Q86Z23 238 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 FTMTQ8N4E7 242 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 LINC00471Q8N535 108 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 CYB561A3Q8NBI2 242 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 OR1M1Q8NGA1 313 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 DNTTIP1Q9H147 329 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 TOR3AQ9H497 397 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 MAGEL2Q9UJ55 1249 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 CDH10Q9Y6N8 788 aa11.16□□□□□ -0.62
TROAP-211ENST00000549891 ZNF593O00488 134 aaPredicted RBP11.15□□□□□ -0.62
TROAP-211ENST00000549891 NPFFO15130 113 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 KRT36O76013 467 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 ANXA2P07355 339 aaKnown RBP11.15□□□□□ -0.62
TROAP-211ENST00000549891 HSD11B1P28845 292 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 BLVRAP53004 296 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 FAM3AP98173 230 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 EGR3Q06889 387 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 IKZF1Q13422 519 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 TEX30Q5JUR7 227 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 PGBD2Q6P3X8 592 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 WDR82Q6UXN9 313 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 SLC16A9Q7RTY1 509 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 FAM216BQ8N7L0 139 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 OR52H1Q8NGJ2 320 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 OR51L1Q8NGJ5 315 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 REEP6Q96HR9 211 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 DDOQ99489 341 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 DCTN5Q9BTE1 182 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 EGLN3Q9H6Z9 239 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 DNAJB11Q9UBS4 358 aa11.15□□□□□ -0.62
TROAP-211ENST00000549891 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
TROAP-211ENST00000549891 ANXA2P2A6NMY6 339 aa11.14□□□□□ -0.63
TROAP-211ENST00000549891 RNASEK-C17orf49H0YIS7 233 aa11.14□□□□□ -0.63
TROAP-211ENST00000549891 ACOT8O14734 319 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms