RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 PNPLA2Q96AD5 504 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF2Q9BSG1 426 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 HEXA-AS1Q9H8Q6 139 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 HSPA12AO43301 675 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 LDOC1O95751 146 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 CD79AP11912 226 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 RGS19P49795 217 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 FHL1Q13642 323 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 C11orf87Q6NUJ2 197 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 KCNRGQ8N5I3 272 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ARL11Q969Q4 196 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 SLC5A7Q9GZV3 580 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 LINC00862A6NCI5 91 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ID4P47928 161 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 MISPQ8IVT2 679 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 GPR137CQ8N3F9 429 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 OR51F2Q8NH61 342 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 FNDC9Q8TBE3 224 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 NMNAT2Q9BZQ4 307 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 ESRP2Q9H6T0 727 aaKnown RBP12.6□□□□□ -0.39
CACNB3-209ENST00000548860 FAM86C1Q9NVL1 165 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 MEMO1Q9Y316 297 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 SHANK1Q9Y566 2161 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 PCNX3Q9H6A9 2034 aa12.6□□□□□ -0.39
CACNB3-209ENST00000548860 A0A0D9SG52 128 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 A0A1W2PPC1 479 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CCR5P51681 352 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 IKZF1Q13422 519 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 UNQ9370/PRO34162Q6UXP9 181 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CLEC1AQ8NC01 280 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 MFSD8Q8NHS3 518 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 SECTM1Q8WVN6 248 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 SGCZQ96LD1 299 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF416Q9BWM5 594 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 C19orf25Q9UFG5 118 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 MPTX1A8MV57 137 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 NPIPB9F8W1W9 429 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 TNFSF11O14788 317 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 IL5P05113 134 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 S100A9P06702 114 aaKnown RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 IL32P24001 234 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CSF2RBP32927 897 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CAMLGP49069 296 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF84P51523 738 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 PCK2Q16822 640 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ZNF275Q9NSD4 429 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 OBSL1O75147 1896 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 RFPL4AA6NLU0 287 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 RFPL4AL1F8VTS6 287 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 DAOP14920 347 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 MGMTP16455 207 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 RPS27AP62979 156 aaKnown RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 UBA52P62987 128 aaKnown RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 RAB32Q13637 225 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ELFN2Q5R3F8 820 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 OR8B12Q8NGG6 310 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 FAAP24Q9BTP7 215 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 KCNIP3Q9Y2W7 256 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-209ENST00000548860 DOCK10Q96BY6 2186 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 BDP1A6H8Y1 2624 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 LTBRP36941 435 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CBX5P45973 191 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ACOT7LQ6ZUV0 252 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 MCEMP1Q8IX19 187 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 CHRDQ9H2X0 955 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 ZCCHC4Q9H5U6 513 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 WNT16Q9UBV4 365 aa12.59□□□□□ -0.39
CACNB3-209ENST00000548860 RPS10-NUDT3A0A1W2PQS6 291 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 LRP3O75074 770 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 TSPAN15O95858 294 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 POU2F2P09086 479 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 GGTLC2Q14390 218 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 LINC00696Q6ZRV3 163 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 OR5T1Q8NG75 326 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 HGDQ93099 445 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 MCHR2Q969V1 340 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 NKX6-2Q9C056 277 aaPredicted RBP12.58□□□□□ -0.4
CACNB3-209ENST00000548860 OCIAD1Q9NX40 245 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 ARPC4-TTLL3A0A0A6YYG9 625 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 TMEM200CA6NKL6 621 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 K7EPK0 472 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 FASLGP48023 281 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 VAMP2P63027 116 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms