RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PGA4P0DJD7 388 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 PGA3P0DJD8 388 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 PGA5P0DJD9 388 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TCP1P17987 556 aaKnown RBP1.33□□□□□ -2.2
CCDC38-206ENST00000548771 PBLDP30039 288 aaPredicted RBP1.33□□□□□ -2.2
CCDC38-206ENST00000548771 GGT2P36268 569 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 RAB9AP51151 201 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 C21orf59P57076 290 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TAS2R43P59537 309 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 RPS15P62841 145 aaKnown RBP1.33□□□□□ -2.2
CCDC38-206ENST00000548771 BTN1A1Q13410 526 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 ILKQ13418 452 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 NAB1Q13506 487 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 FAM53BQ14153 422 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 GCSAMLQ5JQS6 135 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TWF2Q6IBS0 349 aaKnown RBP1.33□□□□□ -2.2
CCDC38-206ENST00000548771 CD300LGQ6UXG3 332 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 Q6ZSR6 202 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 OR4C5Q8NGB2 326 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 ENKURQ8TC29 256 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 DYNLL2Q96FJ2 89 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 OR4K3Q96R72 315 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TGS1Q96RS0 853 aaKnown RBP1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TM2D3Q9BRN9 247 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 UQCC2Q9BRT2 126 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 PIGUQ9H490 435 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 TMEM185BQ9H7F4 350 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 UBN2Q6ZU65 1347 aa1.33□□□□□ -2.2
CCDC38-206ENST00000548771 M0R1X1 148 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 SLC19A2O60779 497 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DEDDO75618 318 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 OR2F2O95006 317 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 CD160O95971 181 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 PFN1P07737 140 aaKnown RBP1.32□□□□□ -2.2
CCDC38-206ENST00000548771 CLTAP09496 248 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 BMI1P35226 326 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 RFC3P40938 356 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 PPICP45877 212 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 FABP6P51161 128 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 ZNF235Q14590 738 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 IHHQ14623 411 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 HSDL1Q3SXM5 330 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DEFB134Q4QY38 66 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 TBPL2Q6SJ96 375 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 ZYG11AQ6WRX3 759 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 EIF3MQ7L2H7 374 aaKnown RBP1.32□□□□□ -2.2
CCDC38-206ENST00000548771 ADM2Q7Z4H4 148 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DAZ4Q86SG3 579 aaKnown RBP1.32□□□□□ -2.2
CCDC38-206ENST00000548771 JAGN1Q8N5M9 183 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DCAKDQ8WVC6 231 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 MCUR1Q96AQ8 359 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 RPEQ96AT9 228 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 C8orf44Q96CB5 159 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 SGTBQ96EQ0 304 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 PANX1Q96RD7 426 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 LINC00574Q9H8X3 128 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 CCNB1IP1Q9NPC3 277 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DAZ1Q9NQZ3 744 aaKnown RBP1.32□□□□□ -2.2
CCDC38-206ENST00000548771 NMRK1Q9NWW6 199 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 DCAF16Q9NXF7 216 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 IL37Q9NZH6 218 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 COMMD3-BMI1R4GMX3 469 aa1.32□□□□□ -2.2
CCDC38-206ENST00000548771 LTBP2Q14767 1821 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 COL22A1Q8NFW1 1626 aaPredicted RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 TSPAN11A1L157 253 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 ANKRD65E5RJM6 399 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 SLC16A7O60669 478 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 CDH16O75309 829 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 AGTP01019 485 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 ERCC1P07992 297 aaPredicted RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 STOMP27105 288 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 CALRP27797 417 aaKnown RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 APLNRP35414 380 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 PCK1P35558 622 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 UBE2MP61081 183 aaKnown RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 MERTKQ12866 999 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 BIKQ13323 160 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 RCN1Q15293 331 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 TRMT5Q32P41 509 aaKnown RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 SPANXN2Q5MJ10 180 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 CCDC183Q5T5S1 534 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 VKORC1L1Q8N0U8 176 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 GABRG1Q8N1C3 465 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 DRAM1Q8N682 238 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 OR10W1Q8NGF6 305 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 NRGNQ92686 78 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 RAB1CQ92928 201 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 TMEM159Q96B96 161 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 C18orf15Q96N68 181 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 CHP1Q99653 195 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 CALN1Q9BXU9 219 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 GCNT4Q9P109 453 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 RWDD2AQ9UIY3 292 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 RCL1Q9Y2P8 373 aaKnown RBP1.31□□□□□ -2.2
CCDC38-206ENST00000548771 SAR1BQ9Y6B6 198 aa1.31□□□□□ -2.2
CCDC38-206ENST00000548771 BAZ2AQ9UIF9 1905 aaKnown RBP1.3□□□□□ -2.2
CCDC38-206ENST00000548771 KBTBD11-OT1A0A1B0GTJ5 212 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 ISPDA4D126 451 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 A8MWL6 223 aa1.3□□□□□ -2.2
CCDC38-206ENST00000548771 ZNF878C9JN71 531 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms