RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 HIST1H2BJP06899 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SOD3P08294 240 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SPARCP09486 303 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SMIM10L1P0DMW3 83 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 DRD1P21728 446 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BOP23527 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CHATP28329 748 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CRABP1P29762 137 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BBP33778 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CASP6P55212 293 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BDP58876 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BCP62807 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.88
NPAS3-205ENST00000547068 ZNF141Q15928 474 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 KHDC3LQ587J8 217 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.88
NPAS3-205ENST00000547068 GFI1BQ5VTD9 330 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SLC18B1Q6NT16 456 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 MED25Q71SY5 747 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CATSPERDQ86XM0 798 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CACUL1Q86Y37 369 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SEMA6DQ8NFY4 1073 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 SMIM10Q96HG1 83 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CNTD2Q9H8S5 307 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 BCO1Q9HAY6 547 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 MMP25Q9NPA2 562 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 CUTCQ9NTM9 273 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 HHLA2Q9UM44 414 aa9.52□□□□□ -0.88
NPAS3-205ENST00000547068 ARID1BQ8NFD5 2236 aaPredicted RBP9.52□□□□□ -0.89
NPAS3-205ENST00000547068 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 ZNF264O43296 627 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 OR6A2O95222 327 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 DANCRP0C864 163 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 ZNF708P17019 499 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 S1PR1P21453 382 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 ZNF10P21506 573 aaPredicted RBP9.52□□□□□ -0.89
NPAS3-205ENST00000547068 IGFALSP35858 605 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 FHITP49789 147 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 NKX6-1P78426 367 aaPredicted RBP9.52□□□□□ -0.89
NPAS3-205ENST00000547068 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
NPAS3-205ENST00000547068 UNC119Q13432 240 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 SOHLH1Q5JUK2 328 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 FBXO42Q6P3S6 717 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 NKAIN3Q8N8D7 197 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 TMEM104Q8NE00 496 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 FAM3CQ92520 227 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 CTHRC1Q96CG8 243 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 NTNG2Q96CW9 530 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 SUCNR1Q9BXA5 334 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 TMED3Q9Y3Q3 217 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 SPACA6W5XKT8 324 aa9.52□□□□□ -0.89
NPAS3-205ENST00000547068 ELOA3CA0A087WX78 387 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 OR5H15A6NDH6 313 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 OR5H1A6NKK0 313 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 ZNF727A8MUV8 499 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 PRH1P02810 166 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 ASAH2BP0C7U1 165 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 FABP4P15090 132 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 RELQ04864 619 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 ELAVL3Q14576 367 aaKnown RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 KCTD18Q6PI47 426 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SUMF2Q8NBJ7 301 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 OR2I1PQ8NGU4 316 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SHDQ96IW2 340 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SCGB3A2Q96PL1 93 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SRMSQ9H3Y6 488 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SMOC1Q9H4F8 434 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 C19orf12Q9NSK7 152 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 TP53TG5Q9Y2B4 290 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 A0A1B0GV50 99 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SERINC4A6NH21 518 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 RPL36A-HNRNPH2H7BZ11 118 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 P2RY2P41231 377 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 SLC35A1P78382 337 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 UBE2V2Q15819 145 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 HIST2H3PS2Q5TEC6 136 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 DGAT2L6Q6ZPD8 337 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 PRSS41Q7RTY9 318 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 RTN4RL2Q86UN3 420 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 UBALD2Q8IYN6 164 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 GPBAR1Q8TDU6 330 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 LIPHQ8WWY8 451 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 JSRP1Q96MG2 331 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 MBNL1Q9NR56 388 aaKnown RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 LRIT1Q9P2V4 623 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 THAP10Q9P2Z0 257 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-205ENST00000547068 WNT16Q9UBV4 365 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 LRP12Q9Y561 859 aa9.51□□□□□ -0.89
NPAS3-205ENST00000547068 DOCK9Q9BZ29 2069 aa9.5□□□□□ -0.89
NPAS3-205ENST00000547068 EDDM13A0A1B0GTR0 161 aa9.5□□□□□ -0.89
NPAS3-205ENST00000547068 LOC107986453A0A1B0GWG9 222 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms