RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR9K2Q8NGE7 335 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 OR13G1Q8NGZ3 307 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 IP6K3Q96PC2 410 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 SPACA5Q96QH8 159 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 RSRP1Q9BUV0 290 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 TBL1XR1Q9BZK7 514 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 PBOV1Q9GZY1 135 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 MRPS28Q9Y2Q9 187 aaKnown RBP12.6□□□□□ -0.39
SRP54-202ENST00000546080 CPAMD8Q8IZJ3 1885 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 KIR2DS5A0A0G2JLQ3 304 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 A0A0G2JNG1 304 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 KIR2DS3K7RE56 304 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
SRP54-202ENST00000546080 ZNF708P17019 499 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 COL9A1P20849 921 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 GLRA1P23415 457 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 FCGR2CP31995 323 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 ARFRP1Q13795 201 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 KIR2DS5Q14953 304 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 OPN5Q6U736 354 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 LYPD6BQ8NI32 183 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
SRP54-202ENST00000546080 RNF133Q8WVZ7 376 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 EDARADDQ8WWZ3 215 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 C20orf24Q9BUV8 137 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 IL23AQ9NPF7 189 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 DNAH14Q0VDD8 3507 aa12.6□□□□□ -0.39
SRP54-202ENST00000546080 A6NIZ1 184 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 FIGNL2A6NMB9 653 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 NPIPA5E9PKD4 350 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 AP4M1O00189 453 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 CDC14BO60729 498 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 NPIPB7O75200 414 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 RAD51DO75771 328 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 TNFP01375 233 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 HOXB2P14652 356 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 DAOP14920 347 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 BCKDHBP21953 392 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 LAP3P28838 519 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SNCAP37840 140 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 RAP1BP61224 184 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 RAP1AP62834 184 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 HHEXQ03014 270 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 PCK2Q16822 640 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 IAH1Q2TAA2 248 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 MIDNQ504T8 468 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 TMEM59Q9BXS4 323 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SMIM3Q9BZL3 60 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 PARP12Q9H0J9 701 aaKnown RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 TCEAL2Q9H3H9 227 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 BANF2Q9H503 90 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SPACA1Q9HBV2 294 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 NPIPA1Q9UND3 350 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SRPK3Q9UPE1 567 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 CDC14CA4D256 554 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 WRBO00258 174 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SDCBPO00560 298 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 FBP1P09467 338 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 PRF1P14222 555 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 HAAOP46952 286 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 STARD6P59095 220 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 OR2B8PP59922 312 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 FAM3AP98173 230 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 GUK1Q16774 197 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 ADAM5Q6NVV9 412 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 FAM24BQ8N5W8 94 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 COMMD1Q8N668 190 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 KCNG3Q8TAE7 436 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 GPBAR1Q8TDU6 330 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 SLAMF6Q96DU3 332 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 MAP3K3Q99759 626 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 NRSN2Q9GZP1 204 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 TMPRSS5Q9H3S3 457 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 FAM212BQ9NTI7 297 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 C1orf123Q9NWV4 160 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 OSGIN2Q9Y236 505 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 B3GALT5Q9Y2C3 310 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 ATG2BQ96BY7 2078 aa12.59□□□□□ -0.39
SRP54-202ENST00000546080 ARHGEF17Q96PE2 2063 aaPredicted RBP12.59□□□□□ -0.39
SRP54-202ENST00000546080 ALPK2Q86TB3 2170 aa12.58□□□□□ -0.4
SRP54-202ENST00000546080 PMS2P1A4D2B8 440 aa12.58□□□□□ -0.4
SRP54-202ENST00000546080 NME2P1O60361 137 aa12.58□□□□□ -0.4
SRP54-202ENST00000546080 IL11P20809 199 aa12.58□□□□□ -0.4
SRP54-202ENST00000546080 RBMXP38159 391 aaKnown RBP12.58□□□□□ -0.4
SRP54-202ENST00000546080 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
SRP54-202ENST00000546080 FOXK1P85037 733 aa12.58□□□□□ -0.4
SRP54-202ENST00000546080 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms