RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 GPR137Q96N19 417 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZNF251Q9BRH9 671 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TMEM74BQ9NUR3 256 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TET1Q8NFU7 2136 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SHISA8B8ZZ34 492 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MBTPS2O43462 519 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 GATCO43716 136 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 TXNDC12O95881 172 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SMIM6P0DI80 62 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SNCAP37840 140 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 IGSF11Q5DX21 431 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SSX7Q7RTT5 188 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 OR2W3Q7Z3T1 314 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 DTWD2Q8NBA8 298 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 OR5M8Q8NGP6 311 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 PIGCQ92535 297 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SMIM3Q9BZL3 60 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ADAM19Q9H013 955 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MCTS1Q9ULC4 181 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 E9PQ18 207 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 JTBO76095 146 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ACSM4P0C7M7 580 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 CD79AP11912 226 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 CDAP32320 146 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 PNLIPRP3Q17RR3 467 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 WDR74Q6RFH5 385 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 IL34Q6ZMJ4 242 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 PRSS35Q8N3Z0 413 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 LHFPL5Q8TAF8 219 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 SCMH1Q96GD3 660 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 KCNK15Q9H427 330 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TAF9BQ9HBM6 251 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 GNG13Q9P2W3 67 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 HDGFL3Q9Y3E1 203 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 PLXNB3Q9ULL4 1909 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TCRBV16S1A1N1A0A5B0 115 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RFPL4AA6NLU0 287 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ANKRD30BLA7E2S9 258 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RNF212BA8MTL3 300 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RFPL4AL1F8VTS6 287 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TNFSF11O14788 317 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 VAMP5O95183 116 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 DDAH2O95865 285 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 CTLA4P16410 223 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 FGF7P21781 194 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MYBPHQ13203 477 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MPPED2Q15777 294 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZNF239Q16600 458 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 ALKBH2Q6NS38 261 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TMEM81Q6P7N7 255 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZNF808Q8N4W9 903 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 OR6S1Q8NH40 331 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 FLVCR1-AS1Q8TAF5 88 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 FAM213BQ8TBF2 198 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 NUDCD2Q8WVJ2 157 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 KCNE4Q8WWG9 221 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 RBMXL1Q96E39 390 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 SPACA9Q96E40 222 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 ZMIZ1Q9ULJ6 1067 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TIMM8BQ9Y5J9 83 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 CSAG2Q9Y5P2 127 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 C7orf66A4D0T2 115 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 OR5H14A6NHG9 310 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 MSTNO14793 375 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TOX3O15405 576 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 LCN10Q6JVE6 187 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 LHFPL2Q6ZUX7 228 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TMEM18Q96B42 140 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 TINAGL1Q9GZM7 467 aaPredicted RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 PATZ1Q9HBE1 687 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 GPR173Q9NS66 373 aa5.18□□□□□ -1.58
VPS50-220ENST00000544910 NOSIPQ9Y314 301 aaKnown RBP5.18□□□□□ -1.58
VPS50-220ENST00000544910 TRBV5-5A0A0J9YX44 114 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 CD300LBA8K4G0 201 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 LEUTXA8MZ59 168 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 PPP5D1E7EU14 171 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 BCL2L11O43521 198 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 MRPL33O75394 65 aaKnown RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 MPZL1O95297 269 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 SERPINE2P07093 398 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 GSTP1P09211 210 aaKnown RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 ZNF728P0DKX0 622 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 CXCL3P19876 107 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 CD81P60033 236 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 SNRPNP63162 240 aaKnown RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 TAF9Q16594 264 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 DEGS2Q6QHC5 323 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 COMMD1Q8N668 190 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 SCN8AQ9UQD0 1980 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 OR4C45A6NMZ5 311 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 CTSBP07858 339 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 THBS4P35443 961 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 HOXA1P49639 335 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 THBS3P49746 956 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 BAGE3Q86Y29 109 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 BAGE2Q86Y30 109 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 ZDHHC22Q8N966 263 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms